# TARGET T0484 # Using neural net t2k-5651-IDaaHr-5-15-7-15-9-15-13-ebghtl-seeded.net # This is a 4-layer network, with # window units # 5 15 # 7 15 # 9 15 # 13 6 (1 EBGHTL ) # The input amino acid frequencies were determined from # alignment T0484.t2k-thin90.a2m.gz # with weighted counts, using HenikoffWeight(-1 bits/column, 1) # Counts were regularized to probabilities using # /projects/compbio/lib/recode3.20comp # Total sequence weight for alignment was 75 # Pos AA E B G H T C 10N 1S 5N 5N 5N 5N 5N 5N 1 M 0.012 0.014 0.007 0.020 0.374 0.573 2 R 0.030 0.039 0.009 0.028 0.398 0.495 3 D 0.019 0.034 0.007 0.017 0.761 0.162 4 M 0.018 0.021 0.021 0.024 0.845 0.072 5 T 0.019 0.013 0.022 0.022 0.735 0.189 6 E 0.020 0.024 0.055 0.022 0.702 0.177 7 E 0.039 0.073 0.018 0.021 0.322 0.527 8 T 0.048 0.030 0.014 0.022 0.194 0.693 9 R 0.052 0.028 0.052 0.040 0.330 0.498 10 K 0.037 0.026 0.051 0.050 0.325 0.512 11 D 0.008 0.013 0.035 0.027 0.203 0.714 12 L 0.001 0.006 0.002 0.010 0.125 0.856 13 P 0.001 0.001 0.001 0.010 0.030 0.958 14 P 0.001 0.001 0.008 0.962 0.009 0.021 15 E 0.001 0.001 0.007 0.979 0.011 0.003 16 A 0.001 0.001 0.011 0.977 0.010 0.002 17 L 0.001 0.001 0.003 0.988 0.006 0.003 18 R 0.001 0.001 0.004 0.991 0.004 0.001 19 A 0.001 0.001 0.003 0.987 0.006 0.003 20 L 0.001 0.001 0.001 0.988 0.006 0.004 21 A 0.001 0.001 0.001 0.981 0.007 0.010 22 E 0.001 0.001 0.001 0.947 0.010 0.042 23 A 0.001 0.001 0.001 0.966 0.008 0.025 24 E 0.001 0.001 0.001 0.946 0.016 0.037 25 E 0.001 0.001 0.001 0.935 0.026 0.038 26 R 0.001 0.001 0.001 0.897 0.031 0.071 27 R 0.001 0.001 0.001 0.747 0.104 0.148 28 R 0.001 0.001 0.001 0.795 0.106 0.098 29 R 0.001 0.001 0.002 0.704 0.177 0.117 30 A 0.001 0.001 0.005 0.690 0.214 0.091 31 K 0.001 0.001 0.009 0.622 0.241 0.127 32 A 0.001 0.001 0.018 0.536 0.311 0.135 33 L 0.001 0.001 0.014 0.417 0.329 0.239 34 D 0.001 0.002 0.014 0.150 0.336 0.498 35 L 0.003 0.005 0.007 0.042 0.318 0.625 36 P 0.006 0.002 0.047 0.034 0.321 0.590 37 K 0.048 0.012 0.252 0.072 0.311 0.305 38 E 0.123 0.024 0.295 0.088 0.269 0.201 39 I 0.153 0.052 0.153 0.077 0.256 0.309 40 G 0.058 0.012 0.089 0.035 0.406 0.401 41 G 0.032 0.026 0.044 0.015 0.485 0.397 42 R 0.017 0.014 0.022 0.014 0.505 0.428 43 N 0.013 0.019 0.015 0.007 0.580 0.367 44 G 0.014 0.006 0.007 0.003 0.614 0.355 45 P 0.054 0.046 0.026 0.007 0.481 0.385 46 E 0.097 0.052 0.017 0.009 0.421 0.404 47 P 0.135 0.017 0.049 0.014 0.292 0.493 48 V 0.372 0.039 0.036 0.020 0.172 0.361 49 R 0.441 0.032 0.028 0.014 0.200 0.285 50 F 0.318 0.020 0.023 0.024 0.314 0.301 51 G 0.141 0.033 0.036 0.015 0.441 0.334 52 D 0.155 0.024 0.054 0.020 0.460 0.287 53 W 0.107 0.004 0.294 0.035 0.360 0.201 54 E 0.325 0.036 0.150 0.043 0.244 0.201 55 K 0.427 0.061 0.082 0.030 0.308 0.093 56 K 0.304 0.012 0.012 0.014 0.411 0.247 57 G 0.217 0.007 0.017 0.008 0.531 0.221 58 I 0.582 0.020 0.012 0.007 0.240 0.139 59 A 0.637 0.025 0.020 0.014 0.124 0.180 60 I 0.526 0.038 0.025 0.014 0.112 0.286 61 D 0.300 0.026 0.012 0.008 0.092 0.562 62 F 0.005 0.002 0.002 0.002 0.036 0.953