PFRMAT SS
TARGET T0484
METHOD Using neural net t2k-5651-IDaaHr-5-15-7-15-9-15-13-ebghtl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    6 (1 EBGHTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0484.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 75
METHOD
MODEL 1
M C 0.573
R C 0.495
D T 0.761
M T 0.845
T T 0.735
E T 0.702
E C 0.527
T C 0.693
R C 0.498
K C 0.512
D C 0.714
L C 0.856
P C 0.958
P H 0.962
E H 0.979
A H 0.977
L H 0.988
R H 0.991
A H 0.987
L H 0.988
A H 0.981
E H 0.947
A H 0.966
E H 0.946
E H 0.935
R H 0.897
R H 0.747
R H 0.795
R H 0.704
A H 0.690
K H 0.622
A H 0.536
L H 0.417
D C 0.498
L C 0.625
P C 0.590
K T 0.311
E G 0.295
I C 0.309
G T 0.406
G T 0.485
R T 0.505
N T 0.580
G T 0.614
P T 0.481
E T 0.421
P C 0.493
V E 0.372
R E 0.441
F E 0.318
G T 0.441
D T 0.460
W T 0.360
E E 0.325
K E 0.427
K T 0.411
G T 0.531
I E 0.582
A E 0.637
I E 0.526
D C 0.562
F C 0.953
END