T0484.t2k.100-30-str

Sequence_ID	Length	Evalue	FSSP-rep	SCOP_domain
1wc1A	226	5.48e-02		d.58.29.1
2fyxA	143	6.16e-02		d.58.57.1
1wc3A	219	9.72e-02		d.58.29.1
1d2mA	665	3.92e-01	1d2mA	c.37.1.19
				c.37.1.19
1k3xA	262	6.67e-01		a.156.1.2
				b.113.1.1
				g.39.1.8
1s4kA	120	7.34e-01		a.35.1.6
1c4oA	664	7.74e-01	1d2mA	c.37.1.19
				c.37.1.19
1x1fA	149	1.13e+00		b.55.1.1
2cwpA	112	1.58e+00
2daqA	110	2.53e+00		b.34.9.2
1j3mA	129	2.71e+00		d.129.7.1
2hhiA	204	3.00e+00
2o35A	105	3.16e+00
1ag4	103	3.65e+00	1ag4
1qydA	313	3.85e+00		c.2.1.2
1ztsA	139	4.95e+00
1m3kA	392	5.03e+00		c.95.1.1
				c.95.1.1
5cytR	104	5.19e+00	1ycc	a.3.1.1
1u53A	196	5.47e+00
1l2iA	261	5.64e+00		a.123.1.1
3erdA	261	6.12e+00	3erdA	a.123.1.1
1va6A	518	6.51e+00		d.128.1.4
1m4tA	392	6.52e+00		c.95.1.1
				c.95.1.1
1xo0A	324	6.64e+00		a.60.9.1
				d.163.1.1
4crxA	322	6.79e+00	4crxA	a.60.9.1
				d.163.1.1
1v2xA	194	7.07e+00		c.116.1.1
1bgpA	309	7.12e+00		a.93.1.1
1qflA	389	7.49e+00	1afwA	c.95.1.1
				c.95.1.1
1ndbA	596	7.83e+00		c.43.1.3
				c.43.1.3
2aiuA	105	9.11e+00
2qptA	550	9.35e+00
1vjyA	303	9.64e+00		d.144.1.7
3cc1A	433	9.66e+00
1kbuA	349	9.99e+00		a.60.9.1
				d.163.1.1
1crxA	322	1.02e+01	4crxA	a.60.9.1
				d.163.1.1
1py5A	326	1.06e+01		d.144.1.7
1ic8A	194	1.07e+01		a.4.1.1
				a.35.1.1
1b6cB	342	1.11e+01	1b6cB	d.144.1.7
1odmA	331	1.13e+01		b.82.2.1
1rkqA	282	1.21e+01		c.108.1.10
1f44A	324	1.21e+01		a.60.9.1
				d.163.1.1
1xqwA	293	1.22e+01
1yqzA	438	1.23e+01
2ciuA	127	1.24e+01
1mtzA	293	1.25e+01		c.69.1.7
1xxpA	306	1.29e+01		c.45.1.2
2c0dA	221	1.30e+01
1ozhA	566	1.32e+01		c.31.1.3
				c.36.1.5
				c.36.1.9
1khtA	192	1.36e+01		c.37.1.1
2pfzA	301	1.37e+01
2i5nC	336	1.39e+01		a.138.1.2
1dxrC	336	1.39e+01	6prcC	a.138.1.2
1sxjC	340	1.43e+01		a.80.1.1
				c.37.1.20
2hm7A	310	1.43e+01
2i5hA	205	1.44e+01
1akhA	61	1.46e+01	1akhA	a.4.1.1
3cjeA	167	1.48e+01
1clqA	903	1.49e+01	1clqA	c.55.3.5
				e.8.1.1
1xn8A	131	1.53e+01		a.229.1.1
1vajA	214	1.56e+01		d.309.1.1
2gasA	307	1.65e+01
2gdtA	116	1.73e+01
3crxA	343	1.74e+01	4crxA	a.60.9.1
				d.163.1.1
1a52A	258	1.74e+01	3erdA	a.123.1.1
1u4nA	310	1.78e+01		c.69.1.2
1lyvA	306	1.80e+01		c.45.1.2
2pgzA	230	1.82e+01
2yxlA	450	1.86e+01
2e74G	37	1.86e+01		f.23.26.1
2nudC	35	1.86e+01
1ytw	306	1.99e+01	1ytw
1kjsA	74	2.05e+01		a.50.1.1
1bqg	451	2.23e+01	1bqg
1tlqA	189	2.29e+01		a.195.1.1
1yqfA	203	2.32e+01		d.25.1.1
2rdyA	803	2.40e+01
3cjhB	64	2.42e+01
2oikA	154	2.46e+01
1yptA	305	2.57e+01	1ytw	c.45.1.2
1zjrA	211	2.70e+01
2dznB	82	2.71e+01

Sequence_ID	Length	Evalue	FSSP-rep	SCOP_domain
2fltA	149	2.78e+01
1apxA	249	2.78e+01	1ryc	a.93.1.1
1ih7A	903	2.83e+01	1clqA	c.55.3.5
				e.8.1.1
2z98A	200	2.85e+01
1bqnA	558	2.87e+01	1rthA	c.55.3.1
				e.8.1.2
2pqqA	149	2.89e+01
1squA	155	2.93e+01		d.252.1.1
3b7kA	333	2.96e+01
2b4zA	104	2.98e+01
1vp7A	100	3.11e+01		a.7.13.1
2czlA	272	3.12e+01		c.94.1.1
1ghhA	81	3.13e+01	1ghhA	d.57.1.1
2nsfA	261	3.13e+01
1t5bA	201	3.24e+01		c.23.5.3
3c2cA	112	3.24e+01		a.3.1.1
1duvG	333	3.24e+01	1othA	c.78.1.1
				c.78.1.1
1lriA	98	3.25e+01		a.134.1.1
1waaA	93	3.26e+01
1bxm	99	3.26e+01	1bxm
1nnvA	110	3.29e+01		d.17.7.1
1qnxA	209	3.32e+01	1qnxA	d.111.1.1
1tikA	213	3.43e+01		c.23.5.3
1ghpA	258	3.45e+01	1btl	e.3.1.1
2odaA	196	3.46e+01
2a6sA	84	3.49e+01		d.298.1.1
2bypA	214	3.59e+01
1zu0A	529	3.65e+01
1v54C	261	3.66e+01		f.25.1.1
1ea0A	1479	3.68e+01		b.80.4.1
				c.1.4.1
				d.153.1.1
1f75A	249	3.71e+01	1f75A	c.101.1.1
1ys1X	320	3.77e+01
1fit	147	3.82e+01	1fit
1fitA	147	3.82e+01		d.13.1.1
2hfnA	153	3.82e+01
2dt9A	167	3.88e+01
2afwA	329	3.91e+01		c.56.5.8
1ocrC	261	3.96e+01	1ocrC	f.25.1.1

Please cite the following papers:

Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001
Karplus, K. and Karchin, R. and Draper, J. and Casper, J. and Mandel-Gutfreund, Y. and Diekhans, M. and Hughey, R. ``Combining local-structure, fold-recognition, and new-fold methods for protein structure prediction'' Proteins: Structure Function and Genetics53(S6):491-496,15 Oct 2003
Rachel Karchin, Melissa Cline, Yael Mandel-Gutfreund, and Kevin Karplus. ``Hidden Markov models that use predicted local structure for fold recognition: alphabets of backbone geometry.'' Proteins: Structure, Function, and Genetics, 51(4):504--514, June 2003.