Best Alignments for T0484

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1xl3C	1.9462e+01	1xl3C/T0484-1xl3C-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.243.1.1
3b7kA	5.2636e+01	3b7kA/T0484-3b7kA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1k30A	5.5287e+01	1k30A/T0484-1k30A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.112.1.1
1r5lA	6.1263e+01	1r5lA/T0484-1r5lA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1o06A	6.2106e+01	1o06A/T0484-1o06A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2rjbA	6.3092e+01	2rjbA/T0484-2rjbA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qdyB	6.4167e+01	2qdyB/T0484-2qdyB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1du1A	6.4338e+01	1du1A/T0484-1du1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2as0A	6.5514e+01	2as0A/T0484-2as0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.122.1.9 c.66.1.51
1olmA	6.6341e+01	1olmA/T0484-1olmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1d4aA	6.7957e+01	1d4aA/T0484-1d4aA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.23.5.3
1ekfA	6.8516e+01	1ekfA/T0484-1ekfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	e.17.1.1
1konA	7.5775e+01	1konA/T0484-1konA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	e.39.1.1
1auoA	7.6510e+01	1auoA/T0484-1auoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.69.1.14
2oafA	7.9689e+01	2oafA/T0484-2oafA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2dbsA	8.5486e+01	2dbsA/T0484-2dbsA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ajsA	8.5549e+01	1ajsA/T0484-1ajsA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.67.1.1
2oiwA	8.8409e+01	2oiwA/T0484-2oiwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1nvpD	9.0281e+01	1nvpD/T0484-1nvpD-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.32.1.1 b.56.1.1
1ugpB	9.1094e+01	1ugpB/T0484-1ugpB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001