# List of top-scoring protein chains for t2k-w0.5-1-o_sep-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1k30A	368	14.99	c.112.1.1	68067
3b7kA	333	15.33		
1ekfA	365	23.20	e.17.1.1	59445
2oafA	151	26.20		
1xl3C	92	27.21	a.243.1.1	122104
2as0A	396	28.80	b.122.1.9,c.66.1.51	127227,127228
1d4aA	273	33.44	c.23.5.3	31219
1nvpD	108	34.14	a.32.1.1,b.56.1.1	92213,92214
2oiwA	136	42.11		
2d3dA	88	50.02		
1gyzA	60	51.31	a.144.2.1	70793
2chgA	226	52.29		
1cqmA	101	54.31	d.58.14.1	39321
2nudC	35	59.65		
2b78A	385	64.04	b.122.1.9,c.66.1.51	128025,128026
2igtA	332	69.63	c.66.1.51	137401
1gh8A	89	69.96	d.58.12.1	39309
1nh2D	121	73.42	a.32.1.1,b.56.1.1	91876,91877
1konA	249	75.31	e.39.1.1	72823
1ou8A	111	77.21	b.136.1.1	93543
2p71A	132	84.50	a.39.2.1	139516