# List of top-scoring protein chains for t2k-w0.5-1-o_notor2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
3b7kA	333	13.91		
1k30A	368	17.20	c.112.1.1	68067
1ekfA	365	18.32	e.17.1.1	59445
1d4aA	273	23.38	c.23.5.3	31219
1xl3C	92	24.33	a.243.1.1	122104
2as0A	396	26.06	b.122.1.9,c.66.1.51	127227,127228
2oafA	151	28.32		
1nvpD	108	29.57	a.32.1.1,b.56.1.1	92213,92214
1cqmA	101	45.32	d.58.14.1	39321
2oiwA	136	45.65		
2d3dA	88	47.00		
1gyzA	60	50.57	a.144.2.1	70793
2chgA	226	57.00		
2nudC	35	61.46		
1ir6A	424	62.95	c.107.1.2	71342
1nh2D	121	64.15	a.32.1.1,b.56.1.1	91876,91877
2igtA	332	64.38	c.66.1.51	137401
1fkqA	124	66.29	d.2.1.2	36601
1gh8A	89	69.28	d.58.12.1	39309
1auoA	218	71.11	c.69.1.14	34716
1ou8A	111	76.05	b.136.1.1	93543
2b78A	385	78.79	b.122.1.9,c.66.1.51	128025,128026
2aliA	158	80.14	d.38.1.1	126976
1mw7A	240	83.02	e.39.1.1	79557
1vmbA	140	86.31	d.58.14.1	113672