# List of top-scoring protein chains for t2k-w0.5-1-n_sep-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
3b7kA	333	6.362		
1ekfA	365	9.276	e.17.1.1	59445
1k30A	368	9.794	c.112.1.1	68067
1xl3C	92	12.70	a.243.1.1	122104
1konA	249	16.41	e.39.1.1	72823
1auoA	218	22.30	c.69.1.14	34716
1d4aA	273	26.69	c.23.5.3	31219
2as0A	396	32.56	b.122.1.9,c.66.1.51	127227,127228
2ppqA	322	33.38		
1mw7A	240	35.53	e.39.1.1	79557
2nudC	35	37.38		
2p71A	132	38.66	a.39.2.1	139516
2bzsA	236	39.01	c.23.5.3	129560
1yewA	382	39.08		
1sg7A	96	41.66	a.239.1.1	118961
1gyzA	60	41.74	a.144.2.1	70793
2oafA	151	41.87		
2hejA	323	45.04		
2p3eA	420	47.86		
1ojqA	212	48.27	d.166.1.1	93146
2uv0E	175	48.91		
2oqoA	200	50.29		
1jx2B	315	50.56	c.37.1.8	67404
2d3dA	88	52.10		
2vupA	190	53.73		
1ir6A	424	68.75	c.107.1.2	71342
2aliA	158	72.73	d.38.1.1	126976
1kmkA	406	75.39	c.67.1.3	68696
2b78A	385	79.00	b.122.1.9,c.66.1.51	128025,128026
1g8pA	350	80.61	c.37.1.20	60376
2oiwA	136	80.91		
1lfpA	249	82.44	e.39.1.1	73885
1ou8A	111	83.85	b.136.1.1	93543
1d9eA	284	87.36	c.1.10.4	29195
2o88A	58	88.52		
2au7A	175	88.87