# List of top-scoring protein chains for t2k-w0.5-1-n_notor-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
3b7kA	333	9.310		
1k30A	368	16.56	c.112.1.1	68067
1ekfA	365	21.60	e.17.1.1	59445
1auoA	218	25.52	c.69.1.14	34716
1xl3C	92	25.87	a.243.1.1	122104
1d4aA	273	27.26	c.23.5.3	31219
1konA	249	38.70	e.39.1.1	72823
1gyzA	60	41.34	a.144.2.1	70793
2p71A	132	43.57	a.39.2.1	139516
2ppqA	322	44.87		
2vupA	190	45.39		
2bzsA	236	45.69	c.23.5.3	129560
2hejA	323	45.85		
2uv0E	175	46.03		
2nudC	35	46.28		
1ojqA	212	46.50	d.166.1.1	93146
2oqoA	200	50.35		
2oafA	151	52.83		
2as0A	396	54.18	b.122.1.9,c.66.1.51	127227,127228
2p3eA	420	64.99		
1g8pA	350	66.65	c.37.1.20	60376
1sg7A	96	70.43	a.239.1.1	118961
2d3dA	88	75.86		
1mw7A	240	78.91	e.39.1.1	79557
1gh8A	89	80.50	d.58.12.1	39309
1yewA	382	80.88		
1kmkA	406	82.03	c.67.1.3	68696
1nh2D	121	84.79	a.32.1.1,b.56.1.1	91876,91877
1sxjC	340	85.30	a.80.1.1,c.37.1.20	106085,106086
2oiwA	136	85.74		
1jx2B	315	85.99	c.37.1.8	67404
2b0jA	358	86.29	a.100.1.11,c.2.1.6	127639,127640
1nvpD	108	89.99	a.32.1.1,b.56.1.1	92213,92214