# List of top-scoring protein chains for t2k-w0.5-1-bys-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1ekfA	365	7.877	e.17.1.1	59445
1auoA	218	9.055	c.69.1.14	34716
3b7kA	333	9.665		
1d4aA	273	12.51	c.23.5.3	31219
1xl3C	92	15.53	a.243.1.1	122104
2as0A	396	21.02	b.122.1.9,c.66.1.51	127227,127228
2oiwA	136	26.36		
2chgA	226	28.12		
2nudC	35	28.86		
1yewA	382	29.50		
2oafA	151	33.11		
1k30A	368	37.98	c.112.1.1	68067
2oqoA	200	38.76		
1cqmA	101	45.72	d.58.14.1	39321
2hejA	323	49.47		
2bn2A	95	50.52	b.9.1.1	23266
1fkqA	124	53.69	d.2.1.2	36601
1qrdA	273	58.92	c.23.5.3	31217
1npoC	95	59.02	b.9.1.1	23271
1zuuA	58	59.99	b.34.2.1	125688
1ajsA	412	61.70	c.67.1.1	34276
2b0jA	358	70.61	a.100.1.11,c.2.1.6	127639,127640
2mev4	70	71.02		
2d1xA	66	71.42		
1ou8A	111	73.52	b.136.1.1	93543
1ir6A	424	73.70	c.107.1.2	71342
1sxjC	340	75.05	a.80.1.1,c.37.1.20	106085,106086
2bzsA	236	76.05	c.23.5.3	129560
1zj8A	566	76.10		
1tuc	63	79.15		
1kmkA	406	79.43	c.67.1.3	68696
2j6fA	62	80.41		
2esnA	310	80.90	a.4.5.37,c.94.1.1	132333,132334
2ghjA	118	81.22		
1konA	249	88.54	e.39.1.1	72823