Best Alignments for T0484

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1hdfA	1.4474e+01	1hdfA/T0484-1hdfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.11.1.1
2fl4A	1.5633e+01	2fl4A/T0484-2fl4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
2as0A	1.8651e+01	2as0A/T0484-2as0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.122.1.9 c.66.1.51
1wxxA	2.0414e+01	1wxxA/T0484-1wxxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.122.1.9 c.66.1.51
2rauA	2.0897e+01	2rauA/T0484-2rauA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1vr8A	2.1495e+01	1vr8A/T0484-1vr8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.312.1.1
2gt1A	2.3962e+01	2gt1A/T0484-2gt1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1mveA	2.4593e+01	1mveA/T0484-1mveA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.29.1.2
2nudC	2.4944e+01	2nudC/T0484-2nudC-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1g5cA	2.8222e+01	1g5cA/T0484-1g5cA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.53.2.1
2ayhA	3.5058e+01	2ayhA/T0484-2ayhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.29.1.2
1rdsA	3.5364e+01	1rdsA/T0484-1rdsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.1.1.4
1mwpA	3.7833e+01	1mwpA/T0484-1mwpA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.170.2.1
3bgeA	3.7910e+01	3bgeA/T0484-3bgeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1fusA	3.7938e+01	1fusA/T0484-1fusA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.1.1.4
1ouoA	3.8091e+01	1ouoA/T0484-1ouoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.4.1.6
3cjsA	3.8551e+01	3cjsA/T0484-3cjsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1jqnA	4.0170e+01	1jqnA/T0484-1jqnA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.12.3
1vi3A	4.6615e+01	1vi3A/T0484-1vi3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.17.1.2
2yykA	4.9415e+01	2yykA/T0484-2yykA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001