PFRMAT RR
TARGET T0484
AUTHOR 4008-1775-0004
REMARK From group SAM-TO6 under the direction of
REMARK Kevin Karplus.
REMARK Residue-residue contact predictions
REMARK  by George Shackelford and Kevin Karplus
REMARK The value given is an approximation of the probability
REMARK as provided by the neural network.
REMARK The predictions are limited to a score >= .18 which
REMARK is an approximation of the probability.
REMARK
METHOD The predictor is an artificial neural network.
METHOD NN: con.aa5str2_5near5nsep5.entmi_epplcc.th62.47.net
METHOD Inputs may include separation and sequence length,
METHOD e-value statistic based on mutual information values,
METHOD a statistic based on propensity of residues in contact.
METHOD Other inputs are distributions from alignments and
METHOD secondary predictions from SAM-t04 and/or SAM-t06 of
METHOD the University of California, Santa Cruz
REMARK 
REMARK Starting column is 1
MODEL 1
MRDMTEETRKDLPPEALRALAEAEERRRRAKALDLPKEIGGRNGPEPVRF
GDWEKKGIAIDF
3 12 0 8 0.495143
3 13 0 8 0.447959
3 14 0 8 0.377006
3 15 0 8 0.354577
3 16 0 8 0.47519
3 17 0 8 0.359254
3 19 0 8 0.386776
3 20 0 8 0.345406
3 26 0 8 0.332149
3 32 0 8 0.451127
3 33 0 8 0.408651
3 34 0 8 0.331452
3 35 0 8 0.508124
3 37 0 8 0.381256
3 38 0 8 0.349371
3 39 0 8 0.372766
3 43 0 8 0.352707
3 46 0 8 0.375177
3 47 0 8 0.359678
3 48 0 8 0.396173
3 49 0 8 0.404426
3 50 0 8 0.397654
3 55 0 8 0.363091
3 56 0 8 0.409307
3 57 0 8 0.346482
3 58 0 8 0.337639
3 59 0 8 0.383573
4 13 0 8 0.494387
4 14 0 8 0.580854
4 15 0 8 0.647439
4 16 0 8 0.786895
4 17 0 8 0.639021
4 18 0 8 0.538121
4 19 0 8 0.732138
4 20 0 8 0.619761
4 21 0 8 0.404202
4 22 0 8 0.454976
4 23 0 8 0.561046
4 25 0 8 0.466439
4 26 0 8 0.53214
4 27 0 8 0.439781
4 28 0 8 0.479781
4 29 0 8 0.556298
4 30 0 8 0.467565
4 31 0 8 0.331363
4 32 0 8 0.660077
4 33 0 8 0.637397
4 34 0 8 0.364902
4 35 0 8 0.603029
4 36 0 8 0.353844
4 37 0 8 0.44416
4 38 0 8 0.432568
4 39 0 8 0.561438
4 40 0 8 0.327509
4 41 0 8 0.359196
4 43 0 8 0.352178
4 45 0 8 0.353297
4 47 0 8 0.506706
4 48 0 8 0.470216
4 49 0 8 0.475676
4 50 0 8 0.542724
4 52 0 8 0.374326
4 53 0 8 0.342989
4 55 0 8 0.474412
4 56 0 8 0.439843
4 57 0 8 0.394823
4 58 0 8 0.412628
4 59 0 8 0.606
4 60 0 8 0.430447
5 14 0 8 0.464844
5 15 0 8 0.370307
5 16 0 8 0.566034
5 17 0 8 0.489088
5 18 0 8 0.37251
5 19 0 8 0.426766
5 20 0 8 0.415846
5 23 0 8 0.354357
5 26 0 8 0.330041
5 32 0 8 0.388382
5 33 0 8 0.407296
5 35 0 8 0.434531
5 37 0 8 0.380905
5 38 0 8 0.405292
5 39 0 8 0.368544
5 40 0 8 0.329859
5 41 0 8 0.349235
5 43 0 8 0.336611
5 46 0 8 0.411673
5 47 0 8 0.387296
5 48 0 8 0.377182
5 49 0 8 0.440813
5 50 0 8 0.409612
5 52 0 8 0.339443
5 55 0 8 0.37888
5 57 0 8 0.36408
5 58 0 8 0.347132
5 59 0 8 0.328212
6 16 0 8 0.366316
6 35 0 8 0.336226
6 49 0 8 0.354556
6 56 0 8 0.376601
7 16 0 8 0.545263
7 17 0 8 0.451197
7 19 0 8 0.404391
7 20 0 8 0.409972
7 23 0 8 0.449253
7 25 0 8 0.355773
7 26 0 8 0.408419
7 32 0 8 0.405792
7 33 0 8 0.368678
7 35 0 8 0.454282
7 49 0 8 0.333132
7 55 0 8 0.338787
7 56 0 8 0.340208
8 19 0 8 0.343263
8 32 0 8 0.386468
8 33 0 8 0.361586
8 35 0 8 0.404236
8 38 0 8 0.347912
8 39 0 8 0.339852
8 46 0 8 0.346258
8 47 0 8 0.384241
8 48 0 8 0.355723
8 49 0 8 0.401721
8 50 0 8 0.360619
8 55 0 8 0.349573
8 56 0 8 0.373858
8 57 0 8 0.335373
8 58 0 8 0.32816
9 18 0 8 0.633522
9 19 0 8 0.651126
9 20 0 8 0.592767
9 21 0 8 0.437357
9 22 0 8 0.462231
9 23 0 8 0.585019
9 25 0 8 0.383462
9 26 0 8 0.589031
9 27 0 8 0.399163
9 28 0 8 0.397362
9 29 0 8 0.515643
9 30 0 8 0.442041
9 31 0 8 0.356156
9 32 0 8 0.643747
9 33 0 8 0.605715
9 34 0 8 0.410324
9 35 0 8 0.622522
9 36 0 8 0.355633
9 37 0 8 0.449659
9 38 0 8 0.445716
9 39 0 8 0.527967
9 40 0 8 0.335546
9 41 0 8 0.371747
9 42 0 8 0.337583
9 43 0 8 0.36084
9 45 0 8 0.379331
9 47 0 8 0.502621
9 48 0 8 0.485395
9 49 0 8 0.475085
9 50 0 8 0.5501
9 52 0 8 0.364069
9 53 0 8 0.337505
9 55 0 8 0.444194
9 56 0 8 0.457824
9 57 0 8 0.413758
9 58 0 8 0.428008
9 59 0 8 0.620938
9 60 0 8 0.392119
10 19 0 8 0.446285
10 20 0 8 0.332402
10 32 0 8 0.389939
10 33 0 8 0.371821
10 35 0 8 0.434867
10 37 0 8 0.355904
10 38 0 8 0.349222
10 47 0 8 0.336144
10 49 0 8 0.39423
10 50 0 8 0.334656
10 55 0 8 0.332614
10 56 0 8 0.428171
10 57 0 8 0.349473
11 20 0 8 0.390093
11 26 0 8 0.330875
11 33 0 8 0.383791
11 35 0 8 0.455951
11 37 0 8 0.353502
11 38 0 8 0.327439
11 42 0 8 0.337912
11 43 0 8 0.336792
11 46 0 8 0.337612
11 48 0 8 0.33103
11 49 0 8 0.37994
11 50 0 8 0.343207
12 21 0 8 0.399693
12 22 0 8 0.538829
12 23 0 8 0.701896
12 24 0 8 0.377226
12 25 0 8 0.472092
12 26 0 8 0.687258
12 27 0 8 0.520708
12 28 0 8 0.423122
12 29 0 8 0.349777
12 30 0 8 0.411837
12 32 0 8 0.560659
12 33 0 8 0.478586
12 34 0 8 0.341153
12 35 0 8 0.587617
12 36 0 8 0.330087
12 38 0 8 0.46362
12 39 0 8 0.520666
12 41 0 8 0.353526
12 42 0 8 0.357994
12 46 0 8 0.400764
12 47 0 8 0.564521
12 48 0 8 0.460303
12 49 0 8 0.468274
12 50 0 8 0.552398
12 52 0 8 0.351407
12 53 0 8 0.36357
12 55 0 8 0.437268
12 56 0 8 0.438122
12 57 0 8 0.400463
12 58 0 8 0.440354
12 59 0 8 0.693936
12 60 0 8 0.482634
13 22 0 8 0.371426
13 23 0 8 0.394807
13 26 0 8 0.416394
13 32 0 8 0.396067
13 33 0 8 0.360188
13 35 0 8 0.41346
13 36 0 8 0.344024
13 37 0 8 0.33567
13 38 0 8 0.357858
13 46 0 8 0.343873
13 47 0 8 0.367331
13 48 0 8 0.34225
13 49 0 8 0.409462
13 50 0 8 0.365232
13 55 0 8 0.404018
13 56 0 8 0.370768
13 59 0 8 0.334955
14 23 0 8 0.41518
14 26 0 8 0.445974
14 27 0 8 0.375434
14 32 0 8 0.381424
14 33 0 8 0.340155
14 35 0 8 0.358955
14 47 0 8 0.331477
14 49 0 8 0.352248
14 50 0 8 0.327227
15 26 0 8 0.424557
15 27 0 8 0.343445
15 32 0 8 0.429964
15 33 0 8 0.364814
15 35 0 8 0.423013
15 39 0 8 0.338341
15 47 0 8 0.37979
15 49 0 8 0.363474
15 50 0 8 0.396474
15 56 0 8 0.334295
15 59 0 8 0.347709
16 25 0 8 0.523807
16 26 0 8 0.702176
16 27 0 8 0.597549
16 28 0 8 0.490856
16 29 0 8 0.43832
16 30 0 8 0.421854
16 32 0 8 0.57018
16 33 0 8 0.509988
16 34 0 8 0.368045
16 35 0 8 0.660994
16 36 0 8 0.436116
16 37 0 8 0.357523
16 38 0 8 0.39206
16 39 0 8 0.436239
16 41 0 8 0.340114
16 42 0 8 0.41237
16 45 0 8 0.348131
16 46 0 8 0.373181
16 47 0 8 0.544236
16 48 0 8 0.428826
16 49 0 8 0.420297
16 50 0 8 0.526924
16 52 0 8 0.341335
16 54 0 8 0.328492
16 55 0 8 0.411317
16 56 0 8 0.349947
16 58 0 8 0.407757
16 59 0 8 0.684143
16 60 0 8 0.389047
17 26 0 8 0.630144
17 27 0 8 0.414014
17 28 0 8 0.448198
17 29 0 8 0.449745
17 30 0 8 0.446096
17 32 0 8 0.538211
17 33 0 8 0.522801
17 34 0 8 0.336783
17 35 0 8 0.608007
17 37 0 8 0.403259
17 38 0 8 0.412041
17 39 0 8 0.475903
17 41 0 8 0.331144
17 45 0 8 0.332211
17 46 0 8 0.393338
17 47 0 8 0.516897
17 48 0 8 0.408843
17 49 0 8 0.420936
17 50 0 8 0.546133
17 55 0 8 0.400402
17 56 0 8 0.371675
17 58 0 8 0.341877
17 59 0 8 0.477206
17 60 0 8 0.339046
18 27 0 8 0.394035
18 28 0 8 0.34823
18 32 0 8 0.458093
18 33 0 8 0.388285
18 35 0 8 0.541864
18 36 0 8 0.356475
18 47 0 8 0.38677
18 50 0 8 0.358349
18 56 0 8 0.328106
18 58 0 8 0.340923
18 59 0 8 0.50906
19 28 0 8 0.593418
19 29 0 8 0.363651
19 30 0 8 0.409785
19 32 0 8 0.553406
19 33 0 8 0.425857
19 34 0 8 0.341765
19 35 0 8 0.56736
19 36 0 8 0.358252
19 38 0 8 0.353132
19 39 0 8 0.391997
19 42 0 8 0.348432
19 47 0 8 0.543199
19 48 0 8 0.35444
19 49 0 8 0.357343
19 50 0 8 0.461882
19 55 0 8 0.35808
19 56 0 8 0.340978
19 58 0 8 0.409492
19 59 0 8 0.682602
19 60 0 8 0.437386
20 29 0 8 0.467563
20 30 0 8 0.500086
20 32 0 8 0.678593
20 33 0 8 0.586148
20 34 0 8 0.35093
20 35 0 8 0.709566
20 36 0 8 0.428941
20 37 0 8 0.343432
20 38 0 8 0.42046
20 39 0 8 0.469546
20 41 0 8 0.361202
20 42 0 8 0.457714
20 45 0 8 0.3394
20 47 0 8 0.559896
20 48 0 8 0.44598
20 49 0 8 0.359205
20 50 0 8 0.509704
20 55 0 8 0.433631
20 56 0 8 0.339092
20 58 0 8 0.528796
20 59 0 8 0.826932
20 60 0 8 0.485643
21 32 0 8 0.524445
21 33 0 8 0.403535
21 35 0 8 0.527501
21 47 0 8 0.36872
22 32 0 8 0.373225
22 35 0 8 0.556023
22 47 0 8 0.371708
22 59 0 8 0.449356
23 32 0 8 0.630669
23 33 0 8 0.550641
23 35 0 8 0.602825
23 36 0 8 0.331991
23 39 0 8 0.365387
23 47 0 8 0.455961
23 48 0 8 0.327034
23 50 0 8 0.420186
23 55 0 8 0.346651
23 58 0 8 0.418767
23 59 0 8 0.70819
23 60 0 8 0.431062
24 35 0 8 0.416664
25 35 0 8 0.42746
26 35 0 8 0.735292
26 36 0 8 0.409885
26 37 0 8 0.360565
26 39 0 8 0.375371
26 42 0 8 0.353566
26 47 0 8 0.452724
26 48 0 8 0.363791
26 50 0 8 0.399902
26 55 0 8 0.44
26 56 0 8 0.334422
26 58 0 8 0.415261
26 59 0 8 0.690122
26 60 0 8 0.380072
27 36 0 8 0.511432
27 37 0 8 0.378833
27 42 0 8 0.345854
27 47 0 8 0.393481
27 55 0 8 0.343692
27 59 0 8 0.482733
28 37 0 8 0.347899
28 42 0 8 0.329825
28 47 0 8 0.403655
28 55 0 8 0.36314
28 59 0 8 0.485704
29 39 0 8 0.354259
29 47 0 8 0.37427
29 59 0 8 0.395894
29 60 0 8 0.330745
30 39 0 8 0.413773
30 41 0 8 0.330129
30 45 0 8 0.333354
30 47 0 8 0.456592
30 49 0 8 0.331243
30 50 0 8 0.409786
30 55 0 8 0.381295
30 56 0 8 0.39087
30 58 0 8 0.340982
30 59 0 8 0.372215
31 47 0 8 0.416333
31 49 0 8 0.329412
31 55 0 8 0.328451
32 41 0 8 0.377668
32 42 0 8 0.377458
32 45 0 8 0.441451
32 46 0 8 0.45799
32 47 0 8 0.560562
32 48 0 8 0.424317
32 49 0 8 0.439621
32 50 0 8 0.449641
32 55 0 8 0.468713
32 56 0 8 0.419273
32 57 0 8 0.395507
32 58 0 8 0.503718
32 59 0 8 0.647106
32 60 0 8 0.423713
33 42 0 8 0.431868
33 43 0 8 0.341152
33 45 0 8 0.469634
33 46 0 8 0.481769
33 47 0 8 0.578255
33 48 0 8 0.502955
33 49 0 8 0.485339
33 50 0 8 0.458204
33 53 0 8 0.333085
33 54 0 8 0.342007
33 55 0 8 0.487784
33 56 0 8 0.474708
33 57 0 8 0.428221
33 58 0 8 0.473178
33 59 0 8 0.5537
33 60 0 8 0.345258
34 43 0 8 0.344426
34 46 0 8 0.373907
34 47 0 8 0.43843
34 48 0 8 0.385374
34 49 0 8 0.432909
34 50 0 8 0.371845
34 55 0 8 0.36706
34 56 0 8 0.416358
34 57 0 8 0.377578
34 58 0 8 0.330994
35 44 0 8 0.370001
35 45 0 8 0.470299
35 46 0 8 0.598137
35 47 0 8 0.637222
35 48 0 8 0.63276
35 49 0 8 0.564257
35 50 0 8 0.668026
35 51 0 8 0.402047
35 52 0 8 0.451712
35 53 0 8 0.424341
35 54 0 8 0.502894
35 55 0 8 0.566712
35 56 0 8 0.483679
35 57 0 8 0.46177
35 58 0 8 0.510334
35 59 0 8 0.718396
35 60 0 8 0.611454
36 45 0 8 0.530515
36 46 0 8 0.562384
36 47 0 8 0.618418
36 48 0 8 0.584553
36 49 0 8 0.582775
36 50 0 8 0.569593
36 51 0 8 0.452223
36 52 0 8 0.50828
36 53 0 8 0.434195
36 54 0 8 0.447474
36 55 0 8 0.514976
36 56 0 8 0.505857
36 57 0 8 0.470262
36 58 0 8 0.538595
36 59 0 8 0.555231
36 60 0 8 0.384431
37 46 0 8 0.623074
37 47 0 8 0.621922
37 48 0 8 0.655991
37 49 0 8 0.600919
37 50 0 8 0.618869
37 51 0 8 0.503066
37 52 0 8 0.562768
37 53 0 8 0.453742
37 54 0 8 0.451931
37 55 0 8 0.522957
37 56 0 8 0.530843
37 57 0 8 0.467342
37 58 0 8 0.523798
37 59 0 8 0.55177
37 60 0 8 0.424044
38 47 0 8 0.772027
38 48 0 8 0.762674
38 49 0 8 0.72954
38 50 0 8 0.780051
38 51 0 8 0.682671
38 52 0 8 0.732814
38 53 0 8 0.611905
38 54 0 8 0.552825
38 55 0 8 0.517757
38 56 0 8 0.553365
38 57 0 8 0.585925
38 58 0 8 0.56647
38 59 0 8 0.745469
38 60 0 8 0.575314
39 48 0 8 0.765601
39 49 0 8 0.721685
39 50 0 8 0.780084
39 51 0 8 0.598819
39 52 0 8 0.675193
39 53 0 8 0.613478
39 54 0 8 0.52857
39 55 0 8 0.597658
39 56 0 8 0.588368
39 57 0 8 0.572687
39 58 0 8 0.625927
39 59 0 8 0.798217
39 60 0 8 0.647584
40 49 0 8 0.66795
40 50 0 8 0.70939
40 51 0 8 0.601897
40 52 0 8 0.631748
40 53 0 8 0.508678
40 54 0 8 0.472826
40 55 0 8 0.488206
40 56 0 8 0.564123
40 57 0 8 0.531217
40 58 0 8 0.560453
40 59 0 8 0.512708
40 60 0 8 0.388667
41 50 0 8 0.676564
41 51 0 8 0.589397
41 52 0 8 0.605031
41 53 0 8 0.479782
41 54 0 8 0.452757
41 55 0 8 0.439932
41 56 0 8 0.523131
41 57 0 8 0.518225
41 58 0 8 0.474116
41 59 0 8 0.51115
41 60 0 8 0.385913
42 51 0 8 0.564593
42 52 0 8 0.560129
42 53 0 8 0.395255
42 54 0 8 0.457542
42 55 0 8 0.528621
42 56 0 8 0.573995
42 57 0 8 0.469446
42 58 0 8 0.479617
42 59 0 8 0.512072
42 60 0 8 0.337266
43 52 0 8 0.56246
43 53 0 8 0.334572
43 54 0 8 0.394817
43 55 0 8 0.471785
43 56 0 8 0.524655
43 57 0 8 0.446488
43 58 0 8 0.392055
43 59 0 8 0.443838
43 60 0 8 0.402991
44 54 0 8 0.388157
44 55 0 8 0.41103
44 56 0 8 0.498023
44 57 0 8 0.407779
44 58 0 8 0.336394
45 54 0 8 0.432448
45 55 0 8 0.488758
45 56 0 8 0.509688
45 57 0 8 0.460831
45 58 0 8 0.45396
45 59 0 8 0.577818
45 60 0 8 0.377827
46 55 0 8 0.613416
46 56 0 8 0.681915
46 57 0 8 0.611211
46 58 0 8 0.548061
46 59 0 8 0.670698
46 60 0 8 0.620028
47 56 0 8 0.671162
47 57 0 8 0.738301
47 58 0 8 0.719412
47 59 0 8 0.883006
47 60 0 8 0.742994
48 57 0 8 0.711661
48 58 0 8 0.760185
48 59 0 8 0.924935
48 60 0 8 0.838681
49 58 0 8 0.693899
49 59 0 8 0.826194
49 60 0 8 0.737255
50 59 0 8 0.85458
50 60 0 8 0.771287
51 60 0 8 0.771005
END