Best Alignments for T0482

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2ebdA	1.8837e+01	2ebdA/T0482-2ebdA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2glwA	2.0747e+01	2glwA/T0482-2glwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1u0mA	2.3129e+01	1u0mA/T0482-1u0mA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.95.1.2 c.95.1.2
1tedA	2.5371e+01	1tedA/T0482-1tedA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.95.1.2
1xesA	2.9825e+01	1xesA/T0482-1xesA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1mzjA	3.2076e+01	1mzjA/T0482-1mzjA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.95.1.2 c.95.1.2
1hnjA	3.6795e+01	1hnjA/T0482-1hnjA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.95.1.2 c.95.1.2
1zowA	3.7043e+01	1zowA/T0482-1zowA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1eblA	3.7546e+01	1eblA/T0482-1eblA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1hzpA	4.4784e+01	1hzpA/T0482-1hzpA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.95.1.2 c.95.1.2
1i86A	4.6458e+01	1i86A/T0482-1i86A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.95.1.2 c.95.1.2
2qx5A	5.0540e+01	2qx5A/T0482-2qx5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2c2jA	5.1846e+01	2c2jA/T0482-2c2jA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1jdhB	5.2109e+01	1jdhB/T0482-1jdhB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1bi5A	5.2484e+01	1bi5A/T0482-1bi5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.95.1.2 c.95.1.2
2z90A	5.7344e+01	2z90A/T0482-2z90A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1hn9A	5.7925e+01	1hn9A/T0482-1hn9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.95.1.2 c.95.1.2
1i88A	6.0990e+01	1i88A/T0482-1i88A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.95.1.2 c.95.1.2
1q6hA	6.2088e+01	1q6hA/T0482-1q6hA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1hxvA	6.2294e+01	1hxvA/T0482-1hxvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.26.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001