# List of top-scoring protein chains for t2k-w0.5-1-str4-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1mzjA	339	14.12	c.95.1.2,c.95.1.2	79700,79701
2ebdA	309	17.82		
1tedA	393	25.00	c.95.1.2	106807
2c2jA	211	25.28		
2glwA	92	28.17		
2z90A	161	29.86		
2bbeA	108	31.74		
1hzpA	335	40.52	c.95.1.2,c.95.1.2	61455,61456
1snlA	103	41.76	a.39.1.7	105820
1v77A	212	46.95	c.6.3.2	108402
2a7bA	120	48.17	b.1.10.2	126333
1u0mA	382	49.22	c.95.1.2,c.95.1.2	107557,107558
1hxvA	113	60.81	d.26.1.1	71089
1wdkC	390	66.87	c.95.1.1,c.95.1.1	109258,109259
2c2uA	207	70.81		
1wm3A	72	72.58	d.15.1.1	114736
1hnjA	317	74.07	c.95.1.2,c.95.1.2	35969,35970
1w2tA	432	74.34	b.29.1.19,b.67.2.3	120607,120608
1r42A	615	81.23	d.92.1.5	96968
1ji4A	144	82.90	a.25.1.1	77117
2biiA	424	85.24		
1o0pA	104	88.76	d.58.7.1	86535