# List of top-scoring protein chains for t2k-w0.5-1-n_sep-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1mzjA	339	15.79	c.95.1.2,c.95.1.2	79700,79701
2z90A	161	16.39		
2ebdA	309	23.25		
2c2jA	211	24.35		
2glwA	92	33.26		
1v77A	212	34.60	c.6.3.2	108402
2c2uA	207	36.83		
2c41A	158	46.68		
1ji4A	144	47.74	a.25.1.1	77117
2je6B	250	52.11		
1snlA	103	53.75	a.39.1.7	105820
1tedA	393	55.09	c.95.1.2	106807
2nvaA	372	61.41		
1qfoA	119	61.49	b.1.1.1	19708
2bbeA	108	61.66		
2a7bA	120	67.05	b.1.10.2	126333
1fltX	95	68.31	b.1.1.4	21765
1hnjA	317	70.82	c.95.1.2,c.95.1.2	35969,35970
1hzpA	335	81.59	c.95.1.2,c.95.1.2	61455,61456
1jysA	242	83.53	c.56.2.1	77216
1wdkC	390	84.53	c.95.1.1,c.95.1.1	109258,109259
2imfA	203	88.21