# List of top-scoring protein chains for t2k-w0.5-1-bys-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1mzjA	339	10.65	c.95.1.2,c.95.1.2	79700,79701
2glwA	92	12.11		
2c2jA	211	17.20		
2ebdA	309	18.15		
2z90A	161	20.71		
1hzpA	335	30.65	c.95.1.2,c.95.1.2	61455,61456
2c2uA	207	33.86		
1v77A	212	40.78	c.6.3.2	108402
2nvaA	372	43.01		
2c41A	158	43.19		
2a7bA	120	51.39	b.1.10.2	126333
1ji4A	144	62.05	a.25.1.1	77117
1u0mA	382	62.72	c.95.1.2,c.95.1.2	107557,107558
1hnjA	317	65.13	c.95.1.2,c.95.1.2	35969,35970
2nn6B	249	70.00		
1hxvA	113	70.88	d.26.1.1	71089
1tedA	393	72.96	c.95.1.2	106807
1fltX	95	73.73	b.1.1.4	21765
2d9rA	104	74.89	b.129.2.1	131350
2a5hA	416	78.37		
1jysA	242	78.58	c.56.2.1	77216
2je6B	250	84.92		
2biiA	424	85.26		
1h0cA	392	89.15	c.67.1.3	83424
1x6mA	196	89.41	b.88.1.4	114920