# List of top-scoring protein chains for t2k-w0.5-1-CB_burial_14_7-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2gdm	153	2.902		
2zbwA	335	14.64		
2b4hA	254	21.47		
2glwA	92	23.62		
1uwdA	103	25.77	d.52.8.2	113447
2nn6B	249	28.91		
2r6r1	338	29.88		
2d9rA	104	30.79	b.129.2.1	131350
2p58C	116	35.23		
1wm3A	72	35.50	d.15.1.1	114736
3c57A	95	36.63		
1dg3A	592	37.98	a.114.1.1,c.37.1.8	19078,32153
1qfoA	119	39.78	b.1.1.1	19708
1bahA	37	40.28	g.3.7.2	44154
1a81A	254	40.32	d.93.1.1,d.93.1.1	40507,40508
2c2jA	211	40.91		
1w5fA	353	43.63	c.32.1.1,d.79.2.1	114247,114248
3grs	478	48.23		
2h6bA	250	48.88		
1euvB	86	50.27	d.15.1.1	37598
1w2tA	432	53.15	b.29.1.19,b.67.2.3	120607,120608
1k0rA	366	54.91	b.40.4.5,d.52.3.1,d.52.3.1,d.202.1.1	67961,67962,67963,67964
1slqA	278	60.95	f.47.1.1	105719
1griA	217	61.85	b.34.2.1,b.34.2.1,d.93.1.1	24531,24532,40473
2qxlA	658	67.44		
2z90A	161	69.07		
1snlA	103	71.18	a.39.1.7	105820
2oynA	146	72.30		
1uz3A	102	77.46		
2d4gA	171	83.07		
1utuA	108	88.31		
1dowA	205	89.31	a.24.9.1	16626