Best Alignments for T0482

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1zowA	2.0408e+01	1zowA/T0482-1zowA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2glwA	2.2047e+01	2glwA/T0482-2glwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1hnjA	2.2839e+01	1hnjA/T0482-1hnjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.95.1.2 c.95.1.2
2ebdA	3.1211e+01	2ebdA/T0482-2ebdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1g6oA	4.3772e+01	1g6oA/T0482-1g6oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.11
1ezjA	5.1877e+01	1ezjA/T0482-1ezjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	h.1.14.1
1v5dA	5.2636e+01	1v5dA/T0482-1v5dA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.102.1.2
2pt7A	5.5091e+01	2pt7A/T0482-2pt7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2q18X	5.8058e+01	2q18X/T0482-2q18X-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1tedA	6.0285e+01	1tedA/T0482-1tedA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.95.1.2
2r6hA	6.2265e+01	2r6hA/T0482-2r6hA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1i88A	6.3438e+01	1i88A/T0482-1i88A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.95.1.2 c.95.1.2
1jdhB	6.6675e+01	1jdhB/T0482-1jdhB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1xesA	6.8634e+01	1xesA/T0482-1xesA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1m7vA	7.2990e+01	1m7vA/T0482-1m7vA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.174.1.1
2oynA	7.4603e+01	2oynA/T0482-2oynA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1a3yA	7.7187e+01	1a3yA/T0482-1a3yA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.60.1.1
1rzsA	7.8687e+01	1rzsA/T0482-1rzsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.35.1.2
1ifrA	8.2656e+01	1ifrA/T0482-1ifrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2g7oA	8.2863e+01	2g7oA/T0482-2g7oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.241.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001