# List of top-scoring protein chains for t06-w0.5-1-o_notor2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1zowA	313	9.158		
1v5dA	386	11.71	a.102.1.2	113537
2ebdA	309	12.48		
1g6oA	330	16.42	c.37.1.11	32430
2glwA	92	17.91		
2r6hA	290	21.29		
2q18X	293	27.62		
1hnjA	317	29.45	c.95.1.2,c.95.1.2	35969,35970
1m7vA	363	31.62	d.174.1.1	78748
1ezjA	115	31.85	h.1.14.1	45638
1ku3A	73	32.86	a.4.13.2	73000
2hoqA	241	34.95		
2pt7A	330	36.28		
2oynA	146	36.40		
1a3yA	149	38.58	b.60.1.1	27110
1aj2A	282	44.31	c.1.21.1	29665
1tedA	393	49.57	c.95.1.2	106807
2ps1A	226	55.19		
1u6eA	335	56.80	c.95.1.2,c.95.1.2	119568,119569
1q2hA	69	60.77	a.34.4.1	104498
2j2jA	197	66.02		
1mzjA	339	68.05	c.95.1.2,c.95.1.2	79700,79701
1dp7P	76	68.27	a.4.5.20	16159
1k4iA	233	72.60	d.115.1.2	72056
2f60K	64	74.93		
1mx0A	472	75.11	a.156.1.3,d.14.1.3,d.122.1.2	79618,79619,79620
2g7oA	70	76.18	a.241.1.1	134736
1k8tA	510	76.24	e.41.1.1	68316
1pswA	348	76.72	c.87.1.7	88287
1v4vA	376	78.01	c.87.1.3	100313
2rilA	99	81.68		
2uxqA	402	85.41		
2hueC	84	87.29	a.22.1.1	136776
3bs6A	280	87.33		
1rzsA	61	87.60	a.35.1.2	105139
3bkwA	243	89.16