# List of top-scoring protein chains for t06-w0.5-1-o_notor-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1v5dA	386	8.716	a.102.1.2	113537
1g6oA	330	12.33	c.37.1.11	32430
1zowA	313	13.31		
2glwA	92	16.74		
2ebdA	309	20.38		
2q18X	293	26.44		
1ezjA	115	27.14	h.1.14.1	45638
2pt7A	330	27.32		
1hnjA	317	32.17	c.95.1.2,c.95.1.2	35969,35970
2r6hA	290	32.18		
1m7vA	363	32.67	d.174.1.1	78748
2hoqA	241	37.68		
1aj2A	282	44.29	c.1.21.1	29665
2oynA	146	45.65		
2ps1A	226	46.94		
1a3yA	149	47.78	b.60.1.1	27110
1ku3A	73	48.08	a.4.13.2	73000
1q2hA	69	52.00	a.34.4.1	104498
2j2jA	197	54.72		
1tedA	393	59.09	c.95.1.2	106807
1u6eA	335	62.31	c.95.1.2,c.95.1.2	119568,119569
1k8tA	510	62.77	e.41.1.1	68316
1v72A	356	69.32	c.67.1.1	119860
1v4vA	376	69.55	c.87.1.3	100313
2g7oA	70	70.18	a.241.1.1	134736
1dp7P	76	73.19	a.4.5.20	16159
1rzsA	61	73.58	a.35.1.2	105139
1lh0A	213	79.00	c.61.1.1	73896
2g9wA	138	80.12		
1mx0A	472	81.19	a.156.1.3,d.14.1.3,d.122.1.2	79618,79619,79620
1k4iA	233	82.69	d.115.1.2	72056
2rilA	99	85.00		
2vbuA	136	87.94		
3cygA	222	88.84		
1pswA	348	89.74	c.87.1.7	88287