# List of top-scoring protein chains for t06-w0.5-1-n_sep-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1zowA	313	9.935		
1hnjA	317	10.53	c.95.1.2,c.95.1.2	35969,35970
2ebdA	309	18.05		
1a3yA	149	18.54	b.60.1.1	27110
1v5dA	386	19.65	a.102.1.2	113537
2q18X	293	20.79		
2oynA	146	29.78		
2glwA	92	36.66		
1u6eA	335	38.60	c.95.1.2,c.95.1.2	119568,119569
1k8tA	510	42.39	e.41.1.1	68316
1g6oA	330	44.50	c.37.1.11	32430
1ezjA	115	46.15	h.1.14.1	45638
2hoqA	241	48.33		
1m7vA	363	48.67	d.174.1.1	78748
2pt7A	330	50.69		
1rzsA	61	52.89	a.35.1.2	105139
1mzjA	339	57.41	c.95.1.2,c.95.1.2	79700,79701
2g9wA	138	58.96		
2gd9A	189	62.31		
1aj2A	282	69.00	c.1.21.1	29665
2vbuA	136	72.15		
1tedA	393	74.44	c.95.1.2	106807
1sd4A	126	75.16	a.4.5.39	105428
1pq1A	196	78.03	f.1.4.1	94986
1i88A	389	78.37	c.95.1.2,c.95.1.2	66070,66071
1n62B	809	79.99	d.41.1.1,d.133.1.1	80092,80093
2eixA	243	80.77		
1ku3A	73	81.29	a.4.13.2	73000
2r6hA	290	81.55		
2f60K	64	81.79		
2g7oA	70	85.52	a.241.1.1	134736
2cxyA	125	88.71