# List of top-scoring protein chains for t06-w0.5-1-n_notor-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1hnjA	317	12.74	c.95.1.2,c.95.1.2	35969,35970
1zowA	313	13.95		
1v5dA	386	15.71	a.102.1.2	113537
1g6oA	330	20.42	c.37.1.11	32430
2ebdA	309	23.77		
2pt7A	330	30.23		
1ezjA	115	32.68	h.1.14.1	45638
2oynA	146	34.99		
1a3yA	149	36.39	b.60.1.1	27110
2glwA	92	37.19		
2q18X	293	38.21		
1k8tA	510	42.30	e.41.1.1	68316
1m7vA	363	51.71	d.174.1.1	78748
1u6eA	335	63.61	c.95.1.2,c.95.1.2	119568,119569
2hoqA	241	67.02		
2ps1A	226	67.45		
2gd9A	189	69.57		
1rzsA	61	70.86	a.35.1.2	105139
2g7oA	70	72.38	a.241.1.1	134736
2r6hA	290	76.40		
1aj2A	282	77.93	c.1.21.1	29665
2vbuA	136	78.67		
2f60K	64	81.30		
1mzjA	339	82.22	c.95.1.2,c.95.1.2	79700,79701
2eixA	243	82.26		
2rilA	99	84.79		
1ku3A	73	89.61	a.4.13.2	73000
2hzfA	114	89.89