# List of top-scoring protein chains for t06-w0.5-1-bys-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1hnjA	317	9.641	c.95.1.2,c.95.1.2	35969,35970
1zowA	313	14.20		
2glwA	92	15.25		
2r6hA	290	17.51		
2ebdA	309	19.32		
1g6oA	330	22.10	c.37.1.11	32430
1v5dA	386	24.14	a.102.1.2	113537
2hoqA	241	27.26		
1m7vA	363	36.82	d.174.1.1	78748
1rzsA	61	37.34	a.35.1.2	105139
2pt7A	330	46.44		
2q18X	293	47.26		
1ezjA	115	48.12	h.1.14.1	45638
1a3yA	149	55.49	b.60.1.1	27110
2g7oA	70	57.89	a.241.1.1	134736
2hk0A	309	62.01		
3bkwA	243	66.27		
2oynA	146	66.80		
2rhmA	193	66.87		
2vbuA	136	69.20		
1mzjA	339	69.40	c.95.1.2,c.95.1.2	79700,79701
2hzfA	114	72.88		
1u6eA	335	75.07	c.95.1.2,c.95.1.2	119568,119569
1pq1A	196	79.53	f.1.4.1	94986
2qwwA	154	88.01