Best Alignments for T0482

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2glwA	2.5076e+01	2glwA/T0482-2glwA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1u6eA	3.7116e+01	1u6eA/T0482-1u6eA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.95.1.2 c.95.1.2
1jmtA	3.7991e+01	1jmtA/T0482-1jmtA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.58.7.3
1ezjA	4.4169e+01	1ezjA/T0482-1ezjA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	h.1.14.1
1q6hA	4.6008e+01	1q6hA/T0482-1q6hA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.26.1.1
1jdhB	5.5351e+01	1jdhB/T0482-1jdhB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1j3gA	6.0375e+01	1j3gA/T0482-1j3gA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.118.1.1
2b4vA	6.4357e+01	2b4vA/T0482-2b4vA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.160.1.4 d.218.1.10
2yvlA	6.7257e+01	2yvlA/T0482-2yvlA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1yckA	6.8351e+01	1yckA/T0482-1yckA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ebdA	7.8336e+01	2ebdA/T0482-2ebdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2fa1A	7.8552e+01	2fa1A/T0482-2fa1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.190.1.2
2p19A	7.8608e+01	2p19A/T0482-2p19A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2q18X	8.2091e+01	2q18X/T0482-2q18X-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1mz9A	8.2137e+01	1mz9A/T0482-1mz9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ifrA	8.2227e+01	1ifrA/T0482-1ifrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2exrA	8.2227e+01	2exrA/T0482-2exrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2raaA	8.2993e+01	2raaA/T0482-2raaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1rzsA	8.3200e+01	1rzsA/T0482-1rzsA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.35.1.2
2g7oA	8.5004e+01	2g7oA/T0482-2g7oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.241.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001