# List of top-scoring protein chains for t04-w0.5-1-o_notor2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1u6eA	335	10.34	c.95.1.2,c.95.1.2	119568,119569
2b4vA	468	21.77	a.160.1.4,d.218.1.10	127864,127865
2glwA	92	22.63		
1vflA	356	29.43	c.1.9.1	120041
1ezjA	115	39.28	h.1.14.1	45638
1zuwA	272	39.80		
1iuqA	367	40.47	c.112.1.1	90703
1ku3A	73	40.58	a.4.13.2	73000
3grsA	478	45.87	c.3.1.5,c.3.1.5,d.87.1.1	30441,30442,40152
1jmtA	104	47.98	d.58.7.3	63180
1rzsA	61	52.79	a.35.1.2	105139
1k30A	368	59.83	c.112.1.1	68067
1li5A	461	61.45	a.27.1.1,c.26.1.1	73912,73913
2g7oA	70	62.88	a.241.1.1	134736
1u7pA	164	69.18	c.108.1.17	113095
2yyyA	343	73.88		
2f60K	64	80.85		
1x8qA	184	81.83	b.60.1.1	114966
1dp7P	76	86.95	a.4.5.20	16159