# List of top-scoring protein chains for t04-w0.5-1-o_notor-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1u6eA	335	10.81	c.95.1.2,c.95.1.2	119568,119569
2b4vA	468	13.15	a.160.1.4,d.218.1.10	127864,127865
2glwA	92	16.67		
1jmtA	104	25.67	d.58.7.3	63180
1ezjA	115	25.89	h.1.14.1	45638
1iuqA	367	34.49	c.112.1.1	90703
3grsA	478	37.73	c.3.1.5,c.3.1.5,d.87.1.1	30441,30442,40152
1k30A	368	44.19	c.112.1.1	68067
2g7oA	70	47.29	a.241.1.1	134736
1vflA	356	48.50	c.1.9.1	120041
1ku3A	73	56.50	a.4.13.2	73000
2yyyA	343	56.69		
1zuwA	272	58.35		
1rzsA	61	62.57	a.35.1.2	105139
1u7pA	164	63.62	c.108.1.17	113095
2oynA	146	69.22		
1oroA	213	71.52	c.61.1.1	34093
2q18X	293	79.23		
2vbuA	136	84.12