# List of top-scoring protein chains for t04-w0.5-1-dssp-ehl2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1u6eA	335	28.23	c.95.1.2,c.95.1.2	119568,119569
2glwA	92	33.01		
2b4vA	468	33.63	a.160.1.4,d.218.1.10	127864,127865
1ezjA	115	34.11	h.1.14.1	45638
1rzsA	61	42.51	a.35.1.2	105139
3grsA	478	48.51	c.3.1.5,c.3.1.5,d.87.1.1	30441,30442,40152
1rydA	387	52.19	c.2.1.3,d.81.1.5	118801,118802
2g7oA	70	55.98	a.241.1.1	134736
1jmtA	104	58.93	d.58.7.3	63180
1k30A	368	59.98	c.112.1.1	68067
1vflA	356	68.67	c.1.9.1	120041
1w9pA	433	70.06	c.1.8.5,d.26.3.1	114412,114413
1zuwA	272	71.71		
2yyyA	343	74.47		
1elqA	390	83.33	c.67.1.3	34436