# List of top-scoring protein chains for t04-w0.5-1-bys-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1u6eA	335	7.594	c.95.1.2,c.95.1.2	119568,119569
2glwA	92	14.79		
2b4vA	468	29.04	a.160.1.4,d.218.1.10	127864,127865
1rzsA	61	34.96	a.35.1.2	105139
1ezjA	115	41.35	h.1.14.1	45638
2q18X	293	48.12		
1jmtA	104	53.28	d.58.7.3	63180
2vbuA	136	61.19		
2g7oA	70	64.10	a.241.1.1	134736
2oynA	146	77.60		
1elqA	390	78.19	c.67.1.3	34436
3grsA	478	79.14	c.3.1.5,c.3.1.5,d.87.1.1	30441,30442,40152
3bwgA	239	84.10		
1ku3A	73	84.65	a.4.13.2	73000
1fa0A	537	87.47	d.58.16.1,a.160.1.1,d.218.1.3	39335,75837,75838