Best Alignments for T0481

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2qe9A	1.3728e-18	2qe9A/T0481-2qe9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2hkvA	2.3473e-17	2hkvA/T0481-2hkvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2f22A	5.6028e-16	2f22A/T0481-2f22A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.213.1.2
2ou6A	3.0647e-14	2ou6A/T0481-2ou6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2p1aA	9.5202e-14	2p1aA/T0481-2p1aA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1rxqA	1.3187e-10	1rxqA/T0481-1rxqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.213.1.1
3cexA	6.0935e-09	3cexA/T0481-3cexA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2yqyA	3.1327e-06	2yqyA/T0481-2yqyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qnlA	3.6645e-04	2qnlA/T0481-2qnlA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2nsfA	3.3693e+00	2nsfA/T0481-2nsfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2i7qA	2.0663e+01	2i7qA/T0481-2i7qA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gykB	2.6065e+01	2gykB/T0481-2gykB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.4.1.1
1or0A	3.1913e+01	1or0A/T0481-1or0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.153.1.2
1mpgA	3.2380e+01	1mpgA/T0481-1mpgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.96.1.3 d.129.1.2
1rklA	3.4265e+01	1rklA/T0481-1rklA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2vlqB	3.6910e+01	2vlqB/T0481-2vlqB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2q4xA	3.8043e+01	2q4xA/T0481-2q4xA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.132.1.3
1emvB	3.9014e+01	1emvB/T0481-1emvB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.4.1.1
1g9lA	5.4879e+01	1g9lA/T0481-1g9lA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1uvqC	5.8052e+01	1uvqC/T0481-1uvqC-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001