Best Alignments for T0481

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2qe9A	3.2508e-23	2qe9A/T0481-2qe9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2hkvA	2.2296e-22	2hkvA/T0481-2hkvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ou6A	1.1209e-21	2ou6A/T0481-2ou6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3cexA	1.2390e-20	3cexA/T0481-3cexA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1rxqA	2.2530e-20	1rxqA/T0481-1rxqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.213.1.1
2f22A	3.3111e-17	2f22A/T0481-2f22A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.213.1.2
2p1aA	1.9351e-15	2p1aA/T0481-2p1aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2yqyA	7.6262e-11	2yqyA/T0481-2yqyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2nsfA	1.6693e-08	2nsfA/T0481-2nsfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qnlA	8.4427e-07	2qnlA/T0481-2qnlA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1sk7A	1.2207e+01	1sk7A/T0481-1sk7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.132.1.2
1o5hA	2.7137e+01	1o5hA/T0481-1o5hA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.191.1.1
2oa8A	2.8271e+01	2oa8A/T0481-2oa8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1w85A	3.0419e+01	1w85A/T0481-1w85A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.36.1.11
2hpsA	3.3898e+01	2hpsA/T0481-2hpsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2zcuA	3.4709e+01	2zcuA/T0481-2zcuA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2i09A	3.5936e+01	2i09A/T0481-2i09A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.76.1.5 d.327.1.1
1o98A	3.6320e+01	1o98A/T0481-1o98A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.105.1.1 c.76.1.3
2jo7A	3.8748e+01	2jo7A/T0481-2jo7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1k94A	4.0277e+01	1k94A/T0481-1k94A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.39.1.8

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001