Best Alignments for T0481

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2qe9A	5.0774e-24	2qe9A/T0481-2qe9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2hkvA	6.1359e-22	2hkvA/T0481-2hkvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ou6A	3.1293e-21	2ou6A/T0481-2ou6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3cexA	8.4691e-20	3cexA/T0481-3cexA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1rxqA	2.0899e-17	1rxqA/T0481-1rxqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.213.1.1
2p1aA	4.1671e-13	2p1aA/T0481-2p1aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2yqyA	3.9666e-10	2yqyA/T0481-2yqyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2f22A	6.8497e-10	2f22A/T0481-2f22A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.213.1.2
2nsfA	2.6893e-07	2nsfA/T0481-2nsfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qnlA	2.9986e-07	2qnlA/T0481-2qnlA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2cw2A	1.7991e+01	2cw2A/T0481-2cw2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2f9zC	3.2107e+01	2f9zC/T0481-2f9zC-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ogiA	4.6410e+01	2ogiA/T0481-2ogiA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2nybA	4.6549e+01	2nybA/T0481-2nybA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.2.11.1 d.44.1.1
1kkcA	5.0850e+01	1kkcA/T0481-1kkcA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.2.11.1 d.44.1.1
1oihA	5.1284e+01	1oihA/T0481-1oihA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.82.2.5
2i3sB	5.1447e+01	2i3sB/T0481-2i3sB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2arhA	5.2943e+01	2arhA/T0481-2arhA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.9
2po1B	5.3672e+01	2po1B/T0481-2po1B-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1yu0A	5.6308e+01	1yu0A/T0481-1yu0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001