PFRMAT SS
TARGET T0481
AUTHOR SAM-T02-server
METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    7 (1 EBGHSTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0481.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 141
METHOD
MODEL 1
M C 0.999
C C 0.887
Q C 0.368
S H 0.861
N H 0.902
Q H 0.953
I H 0.963
V H 0.975
S H 0.973
H H 0.971
F H 0.972
L H 0.954
S H 0.914
H H 0.929
R H 0.949
N H 0.970
V H 0.981
T H 0.990
N H 0.994
E H 0.994
L H 0.992
A H 0.975
E H 0.843
K H 0.590
I S 0.522
S C 0.793
K G 0.553
D G 0.701
H G 0.771
Y G 0.288
S C 0.308
Y C 0.408
K C 0.579
P C 0.619
A C 0.670
E T 0.523
T T 0.641
S C 0.529
M C 0.561
S C 0.742
A H 0.983
E H 0.994
E H 0.996
L H 0.998
V H 0.996
K H 0.993
H H 0.990
I H 0.991
L H 0.983
T H 0.963
S H 0.971
F H 0.986
H H 0.988
L H 0.985
F H 0.982
A H 0.972
N H 0.937
V H 0.874
I H 0.760
K H 0.526
E T 0.360
G C 0.407
N C 0.481
A C 0.492
S C 0.529
P C 0.424
F C 0.467
Q C 0.383
N C 0.410
K C 0.479
Q C 0.608
E C 0.616
E C 0.573
T C 0.660
E H 0.969
T H 0.982
D H 0.987
L H 0.992
N H 0.989
V H 0.972
L H 0.955
A H 0.958
K H 0.943
T H 0.937
Y H 0.944
T H 0.963
E H 0.975
K H 0.979
T H 0.986
V H 0.990
A H 0.986
I H 0.981
L H 0.939
E H 0.721
Q T 0.500
L S 0.480
T C 0.853
E H 0.787
E H 0.702
Q H 0.640
L H 0.665
D H 0.496
R H 0.437
E H 0.327
I E 0.330
D C 0.314
L C 0.380
T C 0.425
S C 0.333
A C 0.512
F C 0.408
G C 0.345
R C 0.395
K C 0.535
V C 0.601
T C 0.774
G H 0.979
R H 0.988
A H 0.992
L H 0.995
L H 0.994
Q H 0.994
L H 0.989
A H 0.987
M H 0.976
E H 0.936
H H 0.862
E H 0.881
I H 0.902
H H 0.865
H H 0.897
K H 0.932
G H 0.944
N H 0.980
L H 0.994
F H 0.997
V H 0.997
Y H 0.998
V H 0.997
R H 0.993
E H 0.962
M T 0.555
G T 0.891
H C 0.874
T C 0.704
E C 0.756
L C 0.792
P E 0.365
F E 0.531
Y C 0.442
Q C 0.496
Q C 0.649
R C 0.833
M C 0.976
END