Best Alignments for T0476

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2i13A	1.0553e+00	2i13A/T0476-2i13A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	k.12.1.1
1a1iA	4.5794e+00	1a1iA/T0476-1a1iA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.37.1.1 g.37.1.1 g.37.1.1
2ctdA	4.5857e+00	2ctdA/T0476-2ctdA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.37.1.1 g.37.1.1
1lv3A	4.8472e+00	1lv3A/T0476-1lv3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.39.1.9
1l8dA	5.2938e+00	1l8dA/T0476-1l8dA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	h.4.12.1
1meyC	5.7402e+00	1meyC/T0476-1meyC-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	k.12.1.1
2drpA	5.8141e+00	2drpA/T0476-2drpA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.37.1.1 g.37.1.1
1a1gA	6.0023e+00	1a1gA/T0476-1a1gA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.37.1.1 g.37.1.1 g.37.1.1
1ma3A	6.8099e+00	1ma3A/T0476-1ma3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.31.1.5
1g2fC	7.5607e+00	1g2fC/T0476-1g2fC-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	k.12.1.1
1llmC	8.8485e+00	1llmC/T0476-1llmC-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.37.1.1 g.37.1.1
1yc5A	9.0222e+00	1yc5A/T0476-1yc5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.31.1.5
1aayA	1.0284e+01	1aayA/T0476-1aayA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.37.1.1 g.37.1.1 g.37.1.1
1wjpA	1.1123e+01	1wjpA/T0476-1wjpA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.37.1.1 g.37.1.1 g.37.1.1
1m2kA	1.1675e+01	1m2kA/T0476-1m2kA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.31.1.5
1a1hA	1.1950e+01	1a1hA/T0476-1a1hA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.37.1.1 g.37.1.1 g.37.1.1
1zaaC	1.2063e+01	1zaaC/T0476-1zaaC-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.37.1.1 g.37.1.1 g.37.1.1
2ctuA	1.2234e+01	2ctuA/T0476-2ctuA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2hjhA	1.2859e+01	2hjhA/T0476-2hjhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qgpA	1.6360e+01	2qgpA/T0476-2qgpA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001