Best Alignments for T0476

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1yc5A	2.6965e+00	1yc5A/T0476-1yc5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.31.1.5
2drpA	3.4978e+00	2drpA/T0476-2drpA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.37.1.1 g.37.1.1
1q1aA	3.5656e+00	1q1aA/T0476-1q1aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.31.1.5
1j8fA	3.6468e+00	1j8fA/T0476-1j8fA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.31.1.5
2i13A	5.6324e+00	2i13A/T0476-2i13A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	k.12.1.1
2ctdA	5.9326e+00	2ctdA/T0476-2ctdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.37.1.1 g.37.1.1
1ma3A	6.3146e+00	1ma3A/T0476-1ma3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.31.1.5
1rmdA	6.9245e+00	1rmdA/T0476-1rmdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.37.1.1 g.44.1.1
1lv3A	7.9887e+00	1lv3A/T0476-1lv3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.39.1.9
1l8dA	9.1635e+00	1l8dA/T0476-1l8dA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	h.4.12.1
1a1hA	9.4550e+00	1a1hA/T0476-1a1hA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.37.1.1 g.37.1.1 g.37.1.1
1a1gA	1.0324e+01	1a1gA/T0476-1a1gA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.37.1.1 g.37.1.1 g.37.1.1
1llmC	1.3696e+01	1llmC/T0476-1llmC-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.37.1.1 g.37.1.1
1a1iA	1.4139e+01	1a1iA/T0476-1a1iA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.37.1.1 g.37.1.1 g.37.1.1
1yuiA	1.6364e+01	1yuiA/T0476-1yuiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.37.1.1
1vk6A	1.7486e+01	1vk6A/T0476-1vk6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.113.1.4 d.113.1.4 g.41.14.1
1uu1A	1.9276e+01	1uu1A/T0476-1uu1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.67.1.1
2gx9A	2.5098e+01	2gx9A/T0476-2gx9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.299.1.1
2eloA	2.8574e+01	2eloA/T0476-2eloA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1tq4A	2.9215e+01	1tq4A/T0476-1tq4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.8

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001