(c) 1992-2000 Regents of the University of California, Santa Cruz
Sequence Alignment and Modeling Software System
http://www.cse.ucsc.edu/research/compbio/sam.html

Citations (SAM, SAM-T99, HMMs)

Sequence numbers correspond to the following labels:

    • T0476 PfG1, Pyrococcus furiosus, 108 residues
                 10        20        30        40        50        60  
                 |         |         |         |         |         |  
   1 ...SAKCPICGSPLKWEELIEEMLIIENFEEIVKDRERFLAQVEEFVFKCPVCGEEFYGKTLPRR
   2 ...MAKCPVCGASLDWRDLIEQMLTLENAEDIFKDREEFLGKLKEFTFKCPVCGEEFLGKYLPMD
   3 ...MAKCPICGSPLKWEELIEEMLIIENFEEIVKDRERFLAQVEEFVFKCPVCGEEFYGKTLPRR
   4 mlgMAKCPVCGASLDWRDLIEQMLTLENAEDIFKDREEFLGKLKEFTFKCPVCGEEFLGKYLPMD
   5 ...MARCPLCGKALDWAELINQMLEKGVGEDVFKDRDKFMETFNDFVFKCPHCGEEFYGRNLPAS
   6 mlgMAKCPVCGSTLDWRELIEQMLSMENAREVFSDKERFLKELEEFTFKCPVCGEEFLGKYLPRE


            70        80        90       100           
            |         |         |         |           
   1 EAEKVFELLNDFKGGIDWENKRVKLKLNDLLALETMLEEWDRRVKR...
   2 EAEKVFELLNDFKGSIDWDNRKVRIRLNQLLALDKMLEEWDRRVKNvgh
   3 EAEKVFELLNDFKGGIDWENKRVKLKLNDLLALETMLEEWDRRVKR...
   4 EAEKVFELLNDFKGSIDWDNRKVRIRLNQLLALDKMLEEWDRRVKNvgh
   5 ETEKVFELLNDFKGSIDWDNKRVRLRLNSLLALDSMLENWDRKMSQkrs
   6 EGEKVFELLNDFKGSIDWERRKVRIRLNQLLVLDKMLEEWDRRVKNvgh