# List of top-scoring protein chains for t06-w0.5-1-near-backbone-11-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1yc5A	246	3.985	c.31.1.5	122910
2drpA	66	6.501	g.37.1.1,g.37.1.1	45026,45027
1q1aA	289	8.484	c.31.1.5	95561
1j8fA	323	11.21	c.31.1.5	62738
2i13A	190	14.30	k.12.1.1	136964
1vk6A	269	16.00	d.113.1.4,d.113.1.4,g.41.14.1	100852,111609,111610
1rmdA	116	16.21	g.37.1.1,g.44.1.1	45025,45322
1ma3A	253	17.15	c.31.1.5	78883
1a1gA	90	19.86	g.37.1.1,g.37.1.1,g.37.1.1	45010,45011,45012
1uu1A	335	20.87	c.67.1.1	99993
1a1hA	90	21.56	g.37.1.1,g.37.1.1,g.37.1.1	45004,45005,45006
1lv3A	68	22.14	g.39.1.9	78231
2ctdA	96	22.91	g.37.1.1,g.37.1.1	130792,130793
1xvhA	129	29.76	a.8.1.2,a.8.1.2	116084,116085
2jrpA	81	33.97		
1a1iA	90	37.16	g.37.1.1,g.37.1.1,g.37.1.1	44998,44999,45000
1tq4A	413	44.80	c.37.1.8	107201
1rutX	188	44.82	g.39.1.3,g.39.1.3,g.39.1.3,g.39.1.3	111939,111940,111941,111942
1yuiA	54	46.82	g.37.1.1	45073
1m2kA	249	52.19	c.31.1.5	84754
1wjpA	107	52.68	g.37.1.1,g.37.1.1,g.37.1.1	114705,114706,114707
1zu1A	127	53.61		
1omrA	201	53.81	a.39.1.5	93349
2eloA	37	56.84		
3cngA	189	57.47		
1lkoA	191	59.46	a.25.1.1,g.41.5.1	78063,78064
1oksA	56	61.95	a.8.5.1	93271
1llmC	88	64.05	g.37.1.1,g.37.1.1	91059,91060
1hk8A	605	88.42	c.7.1.3	83540
1wjvA	79	89.34	g.37.1.2,g.37.1.2	114713,114714