Best Alignments for T0475

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1ohpA	1.5254e-11	1ohpA/T0475-1ohpA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.17.4.3
1buqA	1.6994e-11	1buqA/T0475-1buqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.17.4.3
1nwwA	5.3499e-11	1nwwA/T0475-1nwwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.17.4.8
2bngA	5.7093e-11	2bngA/T0475-2bngA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2geyA	1.0358e-10	2geyA/T0475-2geyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1sjwA	6.4442e-10	1sjwA/T0475-1sjwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.17.4.9
1tuhA	8.8105e-10	1tuhA/T0475-1tuhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.17.4.11
1s5aA	1.5516e-09	1s5aA/T0475-1s5aA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.17.4.10
1ocvA	6.3939e-09	1ocvA/T0475-1ocvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.17.4.3
1ea2A	7.6431e-09	1ea2A/T0475-1ea2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.17.4.3
1oh0A	7.0934e-08	1oh0A/T0475-1oh0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.17.4.3
1dmmA	1.9469e-07	1dmmA/T0475-1dmmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.17.4.3
1opy	2.4610e-07	1opy/T0475-1opy-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3cu3A	2.4707e-06	3cu3A/T0475-3cu3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ux0A	4.7224e-06	2ux0A/T0475-2ux0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2a15A	7.2700e-06	2a15A/T0475-2a15A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.17.4.3
2gxfA	1.6279e-05	2gxfA/T0475-2gxfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3bb9A	1.5709e-04	3bb9A/T0475-3bb9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3b7cA	2.3971e-04	3b7cA/T0475-3b7cA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3cnxA	5.4519e-04	3cnxA/T0475-3cnxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001