# List of top-scoring protein chains for t2k-w0.5-1-dssp-ehl2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1nwwA	149	6.37e-13	d.17.4.8	86306
2geyA	158	9.14e-12		
2bngA	149	5.58e-11		
1sjwA	144	1.03e-10	d.17.4.9	98899
1ohpA	125	1.80e-10	d.17.4.3	118702
1tuhA	156	1.95e-10	d.17.4.11	107345
1buqA	125	4.41e-10	d.17.4.3	38111
1ocvA	125	2.32e-09	d.17.4.3	86810
1ea2A	131	2.34e-09	d.17.4.3	64860
1s5aA	150	2.34e-09	d.17.4.10	98525
1opy	131	4.90e-08		
1oh0A	131	5.65e-08	d.17.4.3	87004
2ux0A	143	2.59e-07		
1dmmA	131	2.79e-07	d.17.4.3	38114
3cu3A	172	8.56e-06		
3bb9A	148	3.76e-05		
2gxfA	142	4.34e-05		
3b7cA	122	4.61e-05		
2a15A	139	0.000392	d.17.4.3	125973
3cnxA	170	0.001331		
1hkxA	147	0.001984	d.17.4.7	83567
2rfrA	155	0.004995		
1m98A	317	0.005838	a.175.1.1,d.17.4.6	78866,78867
2imjA	166	0.007336		
2chcA	170	0.009287		
2f86B	143	0.02008		
2r4iA	123	0.06909		
1tp6A	128	0.3768	d.17.4.12	107184
2rgqA	144	1.969		
3blzA	128	2.175		
2owpA	129	4.416		
2cw9A	194	5.093	d.17.4.13	130920
1utyA	187	7.839	b.147.1.1	108036
1jkgB	250	16.18	d.17.4.2	66796
2aucA	126	23.46		
1vqqA	646	28.11	d.17.4.5,d.175.1.1,e.3.1.1	114009,114010,114011
1bv8A	138	28.68	b.2.4.1	22430
2ifuA	307	31.71		
2sttA	96	32.20	a.4.5.21	16163
2i9wA	184	39.85		
1zx2A	147	40.60		
2o3bB	136	41.46	d.221.1.1	138902
2nwbA	400	41.58		
2yyvA	227	44.61		
4cpvA	108	47.91	a.39.1.4	17198
1fliA	98	49.00	a.4.5.21	16160
2g8mA	264	51.23		
1j57A	143	52.77	d.221.1.1	77079
2c5kT	95	57.38		
2g8oA	264	59.12	d.117.1.1	134779
3cetA	334	62.13		
1tuzA	118	70.92	a.39.1.7	112670
1rkiA	102	82.16	d.308.1.2	118776
2bs6A	90	82.36		
2nogA	173	85.20		
1wchA	315	88.69	c.45.1.2	114508