Best Alignments for T0475

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1nwwA	2.7222e-20	1nwwA/T0475-1nwwA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.17.4.8
1ocvA	4.3709e-20	1ocvA/T0475-1ocvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.17.4.3
1oh0A	2.4113e-19	1oh0A/T0475-1oh0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.17.4.3
1sjwA	2.4940e-19	1sjwA/T0475-1sjwA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.17.4.9
1dmmA	3.6420e-19	1dmmA/T0475-1dmmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.17.4.3
2geyA	3.6924e-19	2geyA/T0475-2geyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2bngA	7.9045e-19	2bngA/T0475-2bngA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1s5aA	9.8467e-19	1s5aA/T0475-1s5aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.17.4.10
1ohpA	2.3203e-18	1ohpA/T0475-1ohpA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.17.4.3
2a15A	2.9321e-18	2a15A/T0475-2a15A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.17.4.3
1opy	3.3013e-18	1opy/T0475-1opy-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1tuhA	9.8425e-18	1tuhA/T0475-1tuhA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.17.4.11
3cu3A	9.1344e-14	3cu3A/T0475-3cu3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gxfA	8.8689e-13	2gxfA/T0475-2gxfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2rfrA	1.4314e-11	2rfrA/T0475-2rfrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2r4iA	1.7705e-11	2r4iA/T0475-2r4iA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3bb9A	1.9468e-11	3bb9A/T0475-3bb9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3cnxA	5.4869e-11	3cnxA/T0475-3cnxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3b7cA	8.3881e-11	3b7cA/T0475-3b7cA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2chcA	1.0943e-10	2chcA/T0475-2chcA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001