T0475.t2k.100-30-dssp-ebghstl

Sequence_ID	Length	Evalue	FSSP-rep	SCOP_domain
2geyA	158	3.13e-12
1tuhA	156	1.55e-11		d.17.4.11
2bngA	149	5.32e-11
1ohpA	125	7.12e-11		d.17.4.3
1oh0A	131	1.03e-10		d.17.4.3
1ocvA	125	1.07e-10		d.17.4.3
1nwwA	149	1.86e-10		d.17.4.8
1ea2A	131	2.63e-10		d.17.4.3
1opy	131	2.84e-10	1opy
1buqA	125	3.12e-10	1opy	d.17.4.3
1dmmA	131	5.05e-10	1opy	d.17.4.3
3b7cA	122	2.75e-08
2gxfA	142	3.23e-08
2a15A	139	1.31e-07		d.17.4.3
1s5aA	150	3.10e-07		d.17.4.10
2ux0A	143	1.18e-06
1hkxA	147	1.51e-06		d.17.4.7
3cu3A	172	1.73e-06
1sjwA	144	2.84e-06		d.17.4.9
2imjA	166	1.44e-05
1m98A	317	3.78e-04		a.175.1.1
				d.17.4.6
1tp6A	128	4.47e-04		d.17.4.12
2rgqA	144	2.72e-03
3cnxA	170	7.60e-03
2chcA	170	8.97e-03
2owpA	129	2.12e-02
3blzA	128	3.07e-02
2retB	175	9.46e-02
1x2gA	337	1.42e-01
3bb9A	148	2.22e-01
2r4iA	123	2.80e-01
1ucdA	190	3.17e-01		d.124.1.1
1knyA	253	4.48e-01	1knyA	a.24.16.1
				d.218.1.1
2nlvA	112	5.70e-01		d.326.1.1
1xu1A	138	7.36e-01		b.22.1.1
1jb2A	127	7.64e-01		d.17.4.2
2novA	496	8.50e-01
2f86B	143	9.82e-01
2rfrA	155	1.10e+00
2fxtA	192	1.20e+00
1m1hA	248	1.25e+00		b.114.1.1
				d.58.42.1
1v6fA	151	1.25e+00		d.109.1.2
2cb4A	291	1.47e+00
1gy6A	127	1.62e+00		d.17.4.2
1vplA	256	1.82e+00		c.37.1.12
1ar0A	127	1.83e+00	1ounA	d.17.4.2
1wmmA	145	1.84e+00		b.122.1.8
1askA	127	1.94e+00	1ounA	d.17.4.2
2h36X	112	2.24e+00
1zeeA	403	2.28e+00		a.266.1.2
2nwbA	400	2.36e+00
2hd9A	145	2.37e+00
1bqg	451	2.60e+00	1bqg
1ounA	127	2.81e+00	1ounA	d.17.4.2
1a9xA	1058	3.02e+00		a.92.1.1
				c.24.1.1
				c.30.1.1
				c.30.1.1
				d.142.1.2
				d.142.1.2
1zd7A	159	3.04e+00
2z4sA	440	3.17e+00
1a5t	334	3.23e+00	1a5t
1a5tA	334	3.23e+00		a.80.1.1
				c.37.1.20
1ybeA	449	3.72e+00		c.1.17.2
				d.41.2.2
2o3bB	136	3.87e+00		d.221.1.1
1dt6A	473	4.09e+00	1dt6A	a.104.1.1
2vptA	215	4.27e+00
2al6A	375	4.38e+00		a.11.2.1
				b.55.1.5
				d.15.1.4
1qo8A	566	4.73e+00	1qjdA	a.138.1.3
				c.3.1.4
				d.168.1.1
2ifsA	169	4.76e+00
1dcqA	278	5.02e+00	1dcqA	d.211.1.1
				g.45.1.1
1nr6A	473	5.10e+00		a.104.1.1
2aehA	369	5.31e+00		a.11.2.1
				b.55.1.5
				d.15.1.4
2nx2A	181	5.41e+00
1o7jA	327	6.04e+00		c.88.1.1
1wcv1	257	6.55e+00
1c3oA	1073	6.56e+00	1c3oA	a.92.1.1
				c.24.1.1
				c.30.1.1
				c.30.1.1
				d.142.1.2
				d.142.1.2
1wmhB	86	6.75e+00		d.15.2.2
2bekA	257	7.50e+00
1sdjA	310	7.68e+00		d.21.1.2
				d.21.1.2
2o28A	184	7.70e+00

Sequence_ID	Length	Evalue	FSSP-rep	SCOP_domain
1kanA	253	7.77e+00	1knyA	a.24.16.1
				d.218.1.1
1zxmA	400	7.89e+00
2z0jA	237	7.91e+00
1vkkA	154	8.12e+00		d.109.1.2
2j73A	103	8.16e+00
2ghsA	326	8.18e+00		b.68.6.1
2j6bA	109	8.54e+00		d.321.1.1
2h4aA	325	9.17e+00
3ckmA	327	9.34e+00
2zbcA	83	9.37e+00
1txoA	237	9.77e+00		d.219.1.1
2b3nA	159	9.86e+00		d.38.1.4
1on3A	523	1.01e+01		c.14.1.4
				c.14.1.4
1pguA	615	1.03e+01		b.69.4.1
				b.69.4.1
1cs0A	1073	1.05e+01		a.92.1.1
				c.24.1.1
				c.30.1.1
				c.30.1.1
				d.142.1.2
				d.142.1.2
2q3xA	171	1.06e+01
1xg4A	295	1.06e+01
1q60A	99	1.08e+01		d.288.1.1
1zo2A	129	1.08e+01
2ifuA	307	1.08e+01
2cw8A	537	1.09e+01
1mumA	295	1.11e+01		c.1.12.7
1lgyA	269	1.26e+01	3tgl	c.69.1.17
1k8kG	151	1.29e+01		a.118.13.1
1w1wA	430	1.32e+01		c.37.1.12
1korA	400	1.32e+01		c.26.2.1
				d.210.1.1
1pz4A	116	1.41e+01		d.106.1.1
3cpkA	150	1.43e+01
1u5xA	140	1.48e+01		b.22.1.1
1avmA	201	1.50e+01	1avmA	a.2.11.1
				d.44.1.1
2bo9A	308	1.53e+01		c.56.5.1
1k6xA	352	1.54e+01		c.2.1.2
2jgqA	233	1.55e+01
1bsmA	201	1.59e+01	1avmA	a.2.11.1
				d.44.1.1
1jqgA	433	1.59e+01		c.56.5.1
				d.58.3.1
1xgkA	352	1.62e+01		c.2.1.2
1wvqA	167	1.62e+01
2e57A	637	1.64e+01
1q7lA	198	1.66e+01		c.56.5.4
1h2iA	209	1.69e+01		d.50.1.3
2qiyA	154	1.71e+01
1xrtA	467	1.93e+01		b.92.1.3
				c.1.9.6
1kwmA	402	1.95e+01		c.56.5.1
				d.58.3.1
2retA	103	1.95e+01
1uwcA	261	1.99e+01		c.69.1.17
1p97A	114	2.00e+01		d.110.3.7
1j57A	143	2.04e+01		d.221.1.1
2zaiA	497	2.12e+01
2bu3A	254	2.16e+01		d.3.1.14
2i6eA	301	2.20e+01
1uswA	260	2.22e+01		c.69.1.17
2gojA	197	2.23e+01
2gekA	406	2.23e+01
2pzeA	229	2.28e+01
1g6oA	330	2.30e+01	1g6oA	c.37.1.11
1fl2A	310	2.34e+01	1hyuA	c.3.1.5
				c.3.1.5
1z5hA	780	2.36e+01
2cgpA	210	2.38e+01	2cgpA	a.4.5.4
				b.82.3.2
1zs7A	190	2.41e+01		b.122.1.1
				d.17.6.4
1jrmA	104	2.42e+01		d.206.1.1
1fxkA	107	2.45e+01	1fxkA	a.2.5.1
1fxkB	109	2.45e+01	1fxkA	a.2.5.1
2uz8A	174	2.47e+01
3c5oA	157	2.49e+01
2cm1A	260	2.50e+01
1rtqA	299	2.50e+01		c.56.5.4
2qvkA	192	2.50e+01
1ofzA	312	2.51e+01		b.68.8.1
2uy1A	493	2.55e+01
1lcyA	325	2.56e+01		b.36.1.4
				b.47.1.1
2epiA	100	2.60e+01
1a3gA	308	2.62e+01	1daaA	e.17.1.1
1p3wA	404	2.63e+01		c.67.1.3
1i7kA	179	2.64e+01	1u9aA	d.20.1.1
3prn	289	2.64e+01	3prn
3prnA	289	2.64e+01		f.4.3.1
1mx4A	168	2.64e+01		d.211.1.1
1bavA	309	2.72e+01	1aye	c.56.5.1
1rkiA	102	2.73e+01		d.308.1.2
1zx2A	147	2.73e+01
1fliA	98	2.77e+01	1awcA	a.4.5.21
2jfrA	234	2.78e+01

Sequence_ID	Length	Evalue	FSSP-rep	SCOP_domain
2pt7A	330	2.80e+01
1gnxA	479	2.82e+01		c.1.8.4
2yweA	600	2.84e+01
2z8rA	591	2.84e+01
2jwyA	168	2.85e+01
1prn	289	2.86e+01	3prn
2jbrA	422	2.87e+01
1knxA	312	2.87e+01		c.98.2.1
				c.91.1.2
1ym5A	300	2.96e+01
1whzA	70	2.98e+01		d.50.3.2
1gk8I	140	2.99e+01		d.73.1.1
2cy2A	174	3.03e+01		d.108.1.1
1ihbA	162	3.03e+01	1bd8	d.211.1.1
2v1lA	148	3.05e+01
1tfuA	157	3.14e+01		c.26.1.3
1f3uB	171	3.15e+01	1f3uB	b.65.1.1
1mwsA	646	3.23e+01		d.17.4.5
				d.175.1.1
				e.3.1.1
1z5rA	306	3.24e+01		c.56.5.1
1yreA	197	3.25e+01		d.108.1.1
1tuzA	118	3.26e+01		a.39.1.7
2z10A	194	3.32e+01
2dxuA	235	3.32e+01
1g66A	207	3.35e+01	1bs9	c.69.1.30
1vmaA	306	3.37e+01		a.24.13.1
				c.37.1.10
1n62C	288	3.39e+01		d.87.2.1
				d.145.1.3
3bs4A	260	3.41e+01
1lf6A	684	3.44e+01		a.102.1.5
				b.30.5.5
1gh8A	89	3.46e+01	1gh8A	d.58.12.1
2c30A	321	3.51e+01
2zgwA	235	3.54e+01
1mkeA	152	3.56e+01		b.55.1.4
1e85A	127	3.60e+01	1bbhA	a.24.3.2
2hqlA	110	3.63e+01
1vqqA	646	3.64e+01		d.17.4.5
				d.175.1.1
				e.3.1.1
1e69B	322	3.65e+01	1e69B	c.37.1.12
2oc6A	124	3.68e+01
1g6nA	210	3.73e+01	2cgpA	a.4.5.4
				b.82.3.2
2va8A	715	3.73e+01
3pmgA	561	3.75e+01	3pmgA	c.84.1.1
				c.84.1.1
				c.84.1.1
				d.129.2.1
2gd9A	189	3.75e+01
1gqeA	365	3.79e+01		e.38.1.1
2f57A	317	3.87e+01
1ir21	140	3.89e+01
2q6fA	309	3.96e+01
2ogxB	270	3.99e+01
1ec7A	446	4.00e+01	1bqg	c.1.11.2
				d.54.1.1

Please cite the following papers:

Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001
Karplus, K. and Karchin, R. and Draper, J. and Casper, J. and Mandel-Gutfreund, Y. and Diekhans, M. and Hughey, R. ``Combining local-structure, fold-recognition, and new-fold methods for protein structure prediction'' Proteins: Structure Function and Genetics53(S6):491-496,15 Oct 2003
Rachel Karchin, Melissa Cline, Yael Mandel-Gutfreund, and Kevin Karplus. ``Hidden Markov models that use predicted local structure for fold recognition: alphabets of backbone geometry.'' Proteins: Structure, Function, and Genetics, 51(4):504--514, June 2003.