Best Alignments for T0474

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2bj7A/T0474-2bj7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bj7A/T0474-2bj7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1994e-037.29e-12 a.43.1.3
d.58.18.4
1p94A/T0474-1p94A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1p94A/T0474-1p94A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.8573e-034.27e-09 a.43.1.3
2gpeA/T0474-2gpeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gpeA/T0474-2gpeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.4705e-021.61e-08
2an7A/T0474-2an7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2an7A/T0474-2an7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.5884e-015.82e-06
2aa1A/T0474-2aa1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2aa1A/T0474-2aa1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.2113e-011.42e-07 a.1.1.2
1x93A/T0474-1x93A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x93A/T0474-1x93A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.8387e-011.39e-07
2r2oA/T0474-2r2oA-t2k-global-adpstyle1.a2m 2r2oA/T0474-2r2oA-t2k-global-adpstyle1.al 1.0100e+001.29e-02
2k29A/T0474-2k29A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2k29A/T0474-2k29A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3803e+004.60e-07
1irqA/T0474-1irqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1irqA/T0474-1irqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9141e+001.19e-06 a.43.1.4
1tc3C/T0474-1tc3C-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tc3C/T0474-1tc3C-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0255e+001.16e-08 1tc3C a.4.1.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001