Best Alignments for T0474

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2ca9A	1.6938e-02	2ca9A/T0474-2ca9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2bj7A	1.8999e-02	2bj7A/T0474-2bj7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.43.1.3 d.58.18.4
2cpgA	1.0979e-01	2cpgA/T0474-2cpgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.43.1.3
2gpeA	5.0622e-01	2gpeA/T0474-2gpeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1p94A	3.5061e+00	1p94A/T0474-1p94A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.43.1.3
2bsqE	7.6890e+00	2bsqE/T0474-2bsqE-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.43.1.8
2q2kA	1.2704e+01	2q2kA/T0474-2q2kA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2an7A	1.3027e+01	2an7A/T0474-2an7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2k29A	2.2810e+01	2k29A/T0474-2k29A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1b01A	3.5276e+01	1b01A/T0474-1b01A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.43.1.3
2d7eA	3.5403e+01	2d7eA/T0474-2d7eA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1x93A	3.7724e+01	1x93A/T0474-1x93A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1uz3A	3.9959e+01	1uz3A/T0474-1uz3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ba3A	4.1756e+01	2ba3A/T0474-2ba3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1yoeA	4.3643e+01	1yoeA/T0474-1yoeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1n69A	4.5111e+01	1n69A/T0474-1n69A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.64.1.3
2jgpA	5.5674e+01	2jgpA/T0474-2jgpA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3bqpA	6.5635e+01	3bqpA/T0474-3bqpA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2masA	7.0587e+01	2masA/T0474-2masA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.70.1.1
2amdA	7.6260e+01	2amdA/T0474-2amdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001