# List of top-scoring protein chains for t2k-w0.5-1-CB_burial_14_7-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2bj7A	138	4.006	a.43.1.3,d.58.18.4	128608,128609
2ca9A	148	7.500		
2z1mA	345	11.18		
2gpeA	52	15.52		
2cpgA	45	24.77	a.43.1.3	17455
1b01A	45	25.54	a.43.1.3	17458
1n7hA	381	26.66	c.2.1.2	80250
2pzmA	330	33.59		
1p94A	76	34.06	a.43.1.3	94380
2b69A	343	35.09	c.2.1.2	127974
3by4A	212	35.97		
1t2aA	375	36.27	c.2.1.2	99078
1d2fA	390	39.82	c.67.1.3	34411
1ecaA	136	44.10	a.1.1.2	15209
2rg4A	216	45.58		
1a0p	290	52.00		
1bcpA	235	53.52	d.166.1.1	42255
1prtA	234	55.13	d.166.1.1	42253
1r6dA	337	58.87	c.2.1.2	97148
2gb3A	409	60.57	c.67.1.1	134903
1ptoA	244	60.61	d.166.1.1	42257
1bea	127	63.35		
1t8qA	336	65.00	c.1.18.3	106669
2p5yA	311	71.32		
2douA	376	75.22		
1b55A	169	76.48	b.55.1.1	26963
1rt8A	513	79.16	a.40.1.1	105095
2is6A	680	79.61		
1qo7A	394	82.45	c.69.1.11	34697
2pk3A	321	86.46