Best Alignments for T0474

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2ca9A	1.8434e-02	2ca9A/T0474-2ca9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2bj7A	2.2055e-02	2bj7A/T0474-2bj7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.43.1.3 d.58.18.4
2cpgA	9.9828e-02	2cpgA/T0474-2cpgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.43.1.3
2gpeA	4.7239e-01	2gpeA/T0474-2gpeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1p94A	2.8512e+00	1p94A/T0474-1p94A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.43.1.3
2bsqE	8.6967e+00	2bsqE/T0474-2bsqE-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.43.1.8
2an7A	1.0338e+01	2an7A/T0474-2an7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2q2kA	1.2338e+01	2q2kA/T0474-2q2kA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2k29A	1.7240e+01	2k29A/T0474-2k29A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1yoeA	2.0504e+01	1yoeA/T0474-1yoeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2d7eA	2.4968e+01	2d7eA/T0474-2d7eA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1uz3A	2.5617e+01	1uz3A/T0474-1uz3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1x93A	3.0826e+01	1x93A/T0474-1x93A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2masA	3.9062e+01	2masA/T0474-2masA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.70.1.1
2ba3A	4.0122e+01	2ba3A/T0474-2ba3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ds2B	4.5859e+01	2ds2B/T0474-2ds2B-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1d2fA	5.2019e+01	1d2fA/T0474-1d2fA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.67.1.3
2c5aA	5.3239e+01	2c5aA/T0474-2c5aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.2.1.2
1vdlA	5.3315e+01	1vdlA/T0474-1vdlA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.5.2.1
1ml8A	5.7789e+01	1ml8A/T0474-1ml8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.227.1.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001