# List of top-scoring protein chains for T0474.t06-w0.5 hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1p94A	76	3.016	a.43.1.3	94380
2cpgA	45	3.139	a.43.1.3	17455
1b01A	45	3.315	a.43.1.3	17458
2jxgA	45	5.670		
2gpeA	52	9.654		
2ay0A	58	14.17		
2bj7A	138	16.20	a.43.1.3,d.58.18.4	128608,128609
2a87A	335	24.22		
2q2kA	70	25.96		
2hzaA	133	33.31	a.43.1.3,d.58.18.4	136907,136908
1kz9A	159	52.71	c.16.1.1	73339
1kyyA	159	53.30	c.16.1.1	73307
2fbaA	492	62.22	a.102.1.1	133239
1gobA	155	69.38	c.55.3.1	33565
2an7A	83	69.90		
2h1tA	188	79.42		
2rexA	121	81.65		
2a59A	159	88.24		
2r2oA	138	88.98