# List of top-scoring protein chains for t06-w0.5-1-o_sep-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2bj7A	138	0.005635	a.43.1.3,d.58.18.4	128608,128609
2ca9A	148	0.006530		
2cpgA	45	0.1232	a.43.1.3	17455
2gpeA	52	0.3445		
1p94A	76	0.6382	a.43.1.3	94380
2k29A	53	2.590		
2q2kA	70	4.308		
2an7A	83	5.997		
1x93A	55	11.21		
1yoeA	322	16.78		
2ds2B	72	18.70		
2d7eA	105	22.39		
1d2fA	390	23.33	c.67.1.3	34411
1uz3A	102	23.52		
1vdlA	80	24.56	a.5.2.1	108528
1ml8A	134	25.77	d.227.1.2	85013
2ba3A	51	26.30		
1wj6A	101	26.89	d.15.2.2	114693
2vebA	195	28.16		
1a53	247	41.39		
1n69A	81	43.88	a.64.1.3	80118
2masA	314	45.45	c.70.1.1	34810
2ns5A	85	46.38		
2c5aA	379	48.09	c.2.1.2	129894
2c0nA	203	51.34		
3b5vA	248	52.06		
2bsqE	77	56.52	a.43.1.8	129102
2c40A	312	58.63		
2e2eA	177	58.85		
2v9dA	343	67.20		
2i3fA	224	69.36		
3cqyA	370	70.24		
2jgpA	520	74.07		
2jobA	102	77.12		
2gs4A	166	78.53	a.25.1.4	135575
2rcyA	262	78.97		
2vqeT	106	79.68		
2e8eA	132	79.69		
3c8cA	240	82.37		
1k3xA	262	83.03	a.156.1.2,b.113.1.1,g.39.1.8	77242,77243,77244
2qp2A	511	89.80		
2d00A	109	89.95