# List of top-scoring protein chains for t06-w0.5-1-n_sep-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2ca9A	148	0.01738		
2bj7A	138	0.02899	a.43.1.3,d.58.18.4	128608,128609
2cpgA	45	0.2155	a.43.1.3	17455
2gpeA	52	0.7904		
1p94A	76	0.7916	a.43.1.3	94380
2bsqE	77	6.490	a.43.1.8	129102
2k29A	53	8.945		
2q2kA	70	11.34		
2an7A	83	12.30		
1yoeA	322	16.72		
2c5aA	379	19.53	c.2.1.2	129894
1ml8A	134	20.87	d.227.1.2	85013
2ba3A	51	23.34		
1uz3A	102	25.56		
2e8eA	132	26.04		
2d7eA	105	26.94		
2ds2B	72	30.73		
1vdlA	80	35.83	a.5.2.1	108528
3c8cA	240	46.64		
1d2fA	390	46.71	c.67.1.3	34411
2jgpA	520	47.88		
1wj6A	101	47.91	d.15.2.2	114693
1oc2A	348	49.63	c.2.1.2	92765
3beeA	93	49.68		
2rcyA	262	51.37		
2masA	314	51.89	c.70.1.1	34810
2z1mA	345	52.32		
1gqnA	252	59.02	c.1.10.1	90514
1x93A	55	61.10		
2v9dA	343	68.26		
2vqeT	106	71.04		
1a53	247	71.15		
1n69A	81	74.67	a.64.1.3	80118
1sur	215	74.76		
1kewA	361	79.39	c.2.1.2	68544
1wvgA	359	81.28	c.2.1.2	121339
2bl0B	145	81.63		
2q4fA	149	83.48	a.24.10.2	139847
2yx0A	342	86.53		
1svmA	377	86.68	c.37.1.20	112126
2e2eA	177	89.29