# List of top-scoring protein chains for t06-w0.5-1-dssp-ehl2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2ca9A	148	0.005843		
2bj7A	138	0.006636	a.43.1.3,d.58.18.4	128608,128609
2cpgA	45	0.1112	a.43.1.3	17455
2gpeA	52	0.4281		
1p94A	76	0.5544	a.43.1.3	94380
2q2kA	70	2.886		
2an7A	83	4.387		
2k29A	53	10.07		
1x93A	55	10.96		
1vdlA	80	16.90	a.5.2.1	108528
1ml8A	134	19.00	d.227.1.2	85013
1yoeA	322	21.29		
2e8eA	132	23.52		
3cihA	739	24.85		
2c5aA	379	25.06	c.2.1.2	129894
2d7eA	105	25.14		
1m12A	84	26.51	a.64.1.1	84745
2bsqE	77	27.33	a.43.1.8	129102
2ba3A	51	40.79		
3c8cA	240	41.16		
1n69A	81	42.09	a.64.1.3	80118
2qp2A	511	42.15		
2masA	314	42.91	c.70.1.1	34810
2vebA	195	43.57		
2gs4A	166	44.87	a.25.1.4	135575
1uz3A	102	49.71		
2ds2B	72	52.92		
1d2fA	390	54.07	c.67.1.3	34411
3bqpA	80	57.91		
2jobA	102	59.14		
2dyjA	95	59.97		
2vqeT	106	60.39		
1ic8A	194	60.61	a.4.1.1,a.35.1.1	76740,76741
3beeA	93	66.09		
1sur	215	71.74		
1k3xA	262	75.83	a.156.1.2,b.113.1.1,g.39.1.8	77242,77243,77244
2q4fA	149	80.22	a.24.10.2	139847
2c5sA	413	84.87	c.26.2.6,d.308.1.1	129950,129951
2ns5A	85	85.17		
1ekjA	221	89.53	c.53.2.1	33364