Best Alignments for T0474

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2ca9A	1.9253e-02	2ca9A/T0474-2ca9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2bj7A	2.1737e-02	2bj7A/T0474-2bj7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.43.1.3 d.58.18.4
2cpgA	1.0179e-01	2cpgA/T0474-2cpgA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.43.1.3
2gpeA	5.6015e-01	2gpeA/T0474-2gpeA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1p94A	5.0004e+00	1p94A/T0474-1p94A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.43.1.3
2bsqE	6.0993e+00	2bsqE/T0474-2bsqE-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.43.1.8
2q2kA	9.1097e+00	2q2kA/T0474-2q2kA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2an7A	1.1306e+01	2an7A/T0474-2an7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1n69A	1.8369e+01	1n69A/T0474-1n69A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.64.1.3
2k29A	2.1805e+01	2k29A/T0474-2k29A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ustA	3.2769e+01	1ustA/T0474-1ustA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1uz3A	3.2938e+01	1uz3A/T0474-1uz3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2d7eA	3.3682e+01	2d7eA/T0474-2d7eA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1x93A	3.7340e+01	1x93A/T0474-1x93A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1utuA	4.0143e+01	1utuA/T0474-1utuA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1hstA	4.2244e+01	1hstA/T0474-1hstA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qkmB	4.2506e+01	2qkmB/T0474-2qkmB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3bqpA	4.4529e+01	3bqpA/T0474-3bqpA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ba3A	4.7191e+01	2ba3A/T0474-2ba3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1k4mA	4.7341e+01	1k4mA/T0474-1k4mA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.1.3

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001