Best Alignments for T0473

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2fi0A	4.5365e-02	2fi0A/T0473-2fi0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.248.1.1
1u3eM	2.2114e+01	1u3eM/T0473-1u3eM-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.4.1.3 d.285.1.1
1y6uA	2.2600e+01	1y6uA/T0473-1y6uA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1w9iA	2.6318e+01	1w9iA/T0473-1w9iA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1w7jA	2.9406e+01	1w7jA/T0473-1w7jA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.3.1 c.37.1.9
2bkhA	3.3468e+01	2bkhA/T0473-2bkhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1fe0A	4.5160e+01	1fe0A/T0473-1fe0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.58.17.1
2v26A	4.5397e+01	2v26A/T0473-2v26A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gwfB	5.5568e+01	2gwfB/T0473-2gwfB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2akaA	6.6374e+01	2akaA/T0473-2akaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1cc8A	6.8981e+01	1cc8A/T0473-1cc8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.58.17.1
2cs8A	6.9335e+01	2cs8A/T0473-2cs8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ae7A	7.0177e+01	1ae7A/T0473-1ae7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.133.1.2
1mvwA	7.0316e+01	1mvwA/T0473-1mvwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	i.15.1.1
1m85A	7.4603e+01	1m85A/T0473-1m85A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	e.5.1.1
1vehA	7.5381e+01	1vehA/T0473-1vehA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.52.8.1
2ofyA	7.6930e+01	2ofyA/T0473-2ofyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3c8yA	7.7042e+01	3c8yA/T0473-3c8yA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1xb4A	7.8961e+01	1xb4A/T0473-1xb4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.54 a.4.5.54
2j01U	7.9575e+01	2j01U/T0473-2j01U-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001