Best Alignments for T0473

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2fi0A	4.6165e-03	2fi0A/T0473-2fi0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.248.1.1
1fe0A	1.3289e+01	1fe0A/T0473-1fe0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.58.17.1
1e0gA	1.4119e+01	1e0gA/T0473-1e0gA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.7.1.1
1txgA	3.2493e+01	1txgA/T0473-1txgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.100.1.6 c.2.1.6
1cc8A	3.4849e+01	1cc8A/T0473-1cc8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.58.17.1
2qnuA	3.6568e+01	2qnuA/T0473-2qnuA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2bkhA	3.7529e+01	2bkhA/T0473-2bkhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1w7jA	3.9113e+01	1w7jA/T0473-1w7jA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.3.1 c.37.1.9
2imfA	3.9883e+01	2imfA/T0473-2imfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3bj6A	4.1602e+01	3bj6A/T0473-3bj6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2akaA	4.2490e+01	2akaA/T0473-2akaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1w9iA	4.2683e+01	1w9iA/T0473-1w9iA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1y6uA	4.6108e+01	1y6uA/T0473-1y6uA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ofyA	4.6275e+01	2ofyA/T0473-2ofyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1y0pA	4.8777e+01	1y0pA/T0473-1y0pA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.138.1.3 c.3.1.4 d.168.1.1
1qupA	5.0442e+01	1qupA/T0473-1qupA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.8.1 d.58.17.1
1mvwA	5.1575e+01	1mvwA/T0473-1mvwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	i.15.1.1
2nyxA	5.1581e+01	2nyxA/T0473-2nyxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1su0B	5.1763e+01	1su0B/T0473-1su0B-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3cjnA	5.1957e+01	3cjnA/T0473-3cjnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001